CX288293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_ALKMQ (Alanyl-tRNA synthetase OS=Alkaliphilus metalliredigens (strain QYMF) GN=alaS PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV+Q GS+V PEKLRFDFSH + + L ++E VN++I L+V + EA+L EAK++ G A+FGE Y D VRVV G Sbjct: 583 HVEQAGSLVTPEKLRFDFSHFEGLSSADLSKVELEVNQEILNALNVDTVEASLEEAKKM-GAMALFGEKYGDDVRVVKTG 661
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_LYSSC (Alanyl-tRNA synthetase OS=Lysinibacillus sphaericus (strain C3-41) GN=alaS PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13 Identity = 40/80 (50.00%), Postives = 55/80 (68.75%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV+Q GS V P++LRFDFSH V E L++IE IVNE++ +++V +E + +AK G A+FGE Y D VRVV+IG Sbjct: 613 HVNQAGSYVGPDRLRFDFSHFGQVTKEELQQIERIVNEKVWDDIEVVIEEMAIDQAK-AKGAMALFGEKYGDVVRVVSIG 691
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_LEGPL (Alanyl-tRNA synthetase OS=Legionella pneumophila (strain Lens) GN=alaS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13 Identity = 36/80 (45.00%), Postives = 57/80 (71.25%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV Q+GS+V E+ RFDFSH +P+ P+ +++IE +VN QI+A +V ++ + AK+ +G A+FGE Y D VRV+++G Sbjct: 570 HVQQRGSLVDAERARFDFSHFEPLTPQQIQQIEEVVNAQIRANNEVITQVMDIESAKQ-SGAVALFGEKYSDAVRVLSMG 648
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_DESRM (Alanyl-tRNA synthetase OS=Desulfotomaculum reducens (strain MI-1) GN=alaS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13 Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV+Q GS+V P++LRFDF+H V E LRRIE IVNE + + L + E +L++AK + G A+FGE Y VRVV +G Sbjct: 582 HVNQAGSLVEPDRLRFDFTHYAAVTSEELRRIEEIVNEAVLSNLSIEVFETSLSKAKEM-GAAALFGEKYGKQVRVVKMG 660
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_BACWK (Alanyl-tRNA synthetase OS=Bacillus weihenstephanensis (strain KBAB4) GN=alaS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13 Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV+Q GS+V E+LRFDFSH V + L +IE IVNE+I +DV + + EAK + G A+FGE Y D VRVV +G Sbjct: 584 HVNQAGSLVTSERLRFDFSHFGQVQADELEKIERIVNEKIWESIDVAISQKAIEEAKEM-GAMALFGEKYGDVVRVVQVG 662
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_BACFR (Alanyl-tRNA synthetase OS=Bacteroides fragilis GN=alaS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13 Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-KEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVE 254 HV+QKGS+V P+ LRFDFSH + V E LR++E +VN +I+A + + + + EAK + G A+FGE Y D VRV+ G +E Sbjct: 580 HVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEHLVNAKIRANVPLQEHRNIPIEEAKEL-GAIALFGEKYGDHVRVIQFGSSIE 663
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_BACFN (Alanyl-tRNA synthetase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=alaS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13 Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-KEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVE 254 HV+QKGS+V P+ LRFDFSH + V E LR++E +VN +I+A + + + + EAK + G A+FGE Y D VRV+ G +E Sbjct: 580 HVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEHLVNAKIRANVPLQEHRNIPIEEAKEL-GAIALFGEKYGDHVRVIQFGSSIE 663
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_AZOSE (Alanyl-tRNA synthetase OS=Azoarcus sp. (strain EbN1) GN=alaS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13 Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVE 254 HV QKGS V P+K RFDF+H P+ PE +R +E +VN +I A + ++ ++ +A++ +G +FGE Y D VRV+AIG E Sbjct: 580 HVQQKGSQVDPDKTRFDFAHTAPLSPEEIREVEDLVNAEILANVATEARVMSIDDAQK-SGAMMLFGEKYGDEVRVLAIGSSKE 662
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_ALKOO (Alanyl-tRNA synthetase OS=Alkaliphilus oremlandii (strain OhILAs) GN=alaS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13 Identity = 39/86 (45.35%), Postives = 58/86 (67.44%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDL 260 HV Q GS+V P++LRFDF+H + + + + +IE VN+QI LDV + E ++ +AK+I G +A+FGE Y D VRVV +G +L Sbjct: 583 HVHQAGSLVTPDRLRFDFTHFEGLTKDQITQIEEKVNQQILMALDVRTFETSIEDAKKI-GAQALFGEKYGDVVRVVKVGEYSTEL 667
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_SHESW (Alanyl-tRNA synthetase OS=Shewanella sp. (strain W3-18-1) GN=alaS PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.110e-12 Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V PE+LRFDFSH + V P L+++E +VN QI+ ++ E + EAK G A+FGE Y VRVV +G Sbjct: 579 HVTQKGSLVDPERLRFDFSHFEAVKPAELKKVEELVNTQIRRNHELKVAEMAIDEAKE-KGAMALFGEKYDAQVRVVTMG 657 The following BLAST results are available for this feature:
BLAST of CX288293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288293 ID=CX288293; Name=CX288293; organism=Citrus clementina; type=EST; length=682bpback to top |