CX288293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_SODGM (Alanyl-tRNA synthetase OS=Sodalis glossinidius (strain morsitans) GN=alaS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V LRFDFSH + + PE +RR+E IVNEQI+ L + + L +A R G A+FGE Y VRV+++G Sbjct: 581 HVGQKGSLVNDHYLRFDFSHNEAMKPEQIRRVEEIVNEQIRCNLPIQTDIMALEDA-RNKGAMALFGEKYEAQVRVLSMG 659
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_SHESR (Alanyl-tRNA synthetase OS=Shewanella sp. (strain MR-7) GN=alaS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V PE+LRFDFSH + V P L+++E +VN QI+ ++ E + EAK G A+FGE Y VRVV +G Sbjct: 579 HVTQKGSLVDPERLRFDFSHFEAVKPAELKQVEELVNTQIRRNHELKVAEMAIDEAKE-KGAMALFGEKYDAQVRVVTMG 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_SHESM (Alanyl-tRNA synthetase OS=Shewanella sp. (strain MR-4) GN=alaS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V PE+LRFDFSH + V P L+++E +VN QI+ ++ E + EAK G A+FGE Y VRVV +G Sbjct: 579 HVTQKGSLVDPERLRFDFSHFEAVKPAELKQVEELVNTQIRRNHELKVAEMAIDEAKE-KGAMALFGEKYDAQVRVVTMG 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_SHESA (Alanyl-tRNA synthetase OS=Shewanella sp. (strain ANA-3) GN=alaS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V PE+LRFDFSH + V P L+++E +VN QI+ ++ E + EAK G A+FGE Y VRVV +G Sbjct: 579 HVTQKGSLVDPERLRFDFSHFEAVKPAELKQVEELVNTQIRRNHELKVAEMAIDEAKE-KGAMALFGEKYDAQVRVVTMG 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_SHEON (Alanyl-tRNA synthetase OS=Shewanella oneidensis GN=alaS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V PE+LRFDFSH + V P L+++E +VN QI+ ++ E + EAK G A+FGE Y VRVV +G Sbjct: 579 HVTQKGSLVDPERLRFDFSHFEAVKPFELKQVEELVNTQIRRNHELKVAEMAIDEAKE-KGAMALFGEKYDSQVRVVTMG 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_PSEU2 (Alanyl-tRNA synthetase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=alaS PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 37/80 (46.25%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V ++LRFDFSH + + E LR +E IVN +I+ +V ++E + AK+ G A+FGE Y D VRV+++G Sbjct: 579 HVQQKGSLVDSQRLRFDFSHFEAIKAEQLRALEDIVNAEIRKNTEVMTEETDIDTAKK-KGAMALFGEKYGDSVRVLSMG 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_PSEHT (Alanyl-tRNA synthetase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=alaS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V E+LRFDFSH + V E LR IE +VN++I+ + ++ + +AK G A+FGE Y D VRVV IG Sbjct: 572 HVGQKGSLVQAERLRFDFSHFEAVTKEELREIERVVNDEIRCNFALSTELMAIDDAK-AKGAMALFGEKYDDEVRVVTIG 650
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_PORGI (Alanyl-tRNA synthetase OS=Porphyromonas gingivalis GN=alaS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 39/85 (45.88%), Postives = 57/85 (67.06%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-KEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVE 254 HV+QKGS V PE LRFDFSH + PE +R++E +V+E+I+A+ ++ +AEA+ + G A+FGE Y + VRV+ G VE Sbjct: 581 HVEQKGSFVSPEVLRFDFSHFGKMSPEEIRKVEELVSERIRADFQREEFRDVPIAEAQAM-GAMALFGEKYGEEVRVLKYGSSVE 664
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_PHOPR (Alanyl-tRNA synthetase OS=Photobacterium profundum GN=alaS PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V P+ LRFDFS+ + V PE LR IE +VNEQI+ + + + AK+ G A+FGE Y D VRV+++G Sbjct: 579 HVAQKGSLVKPDALRFDFSNLEAVKPEQLREIERVVNEQIRLNHSIDTNIMDIESAKQ-KGAMALFGEKYDDEVRVLSMG 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_CARHZ (Alanyl-tRNA synthetase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=alaS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 43/80 (53.75%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV+Q GS+V PE+LRFDF+H + V E LR+IE+IVNE I L V TL EA++ G+ A+F E Y D VRVV IG Sbjct: 581 HVNQAGSLVTPERLRFDFTHFEGVSDEDLRKIENIVNEAILRNLLVQIDYTTLDEARKA-GVIALFDEKYGDLVRVVKIG 659 The following BLAST results are available for this feature:
BLAST of CX288293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288293 ID=CX288293; Name=CX288293; organism=Citrus clementina; type=EST; length=682bpback to top |