CX288293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_BARQU (Alanyl-tRNA synthetase OS=Bartonella quintana GN=alaS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVE 254 HV QKGS+VLP++LRFDFSH K V E L++IE + N+ + +V + L +A G A+FGE Y D VRVV++G +E Sbjct: 581 HVTQKGSLVLPDRLRFDFSHPKSVSSEELKKIEDLANDIVLQNSEVTTHLMALDDAIS-EGAMALFGEKYGDEVRVVSMGNPLE 663
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_BACV8 (Alanyl-tRNA synthetase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=alaS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 38/84 (45.24%), Postives = 50/84 (59.52%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVE 254 HV+QKGS+V PE LRFDFSH + V E LR +E +VN +I+ + + E + G A+FGE Y D VRVV G +E Sbjct: 579 HVEQKGSLVTPESLRFDFSHFQKVTDEQLREVEHLVNAKIRENIPLTEYRNLPIEKAKELGAIALFGEKYGDEVRVVQFGNSIE 662
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_THET8 (Alanyl-tRNA synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=alaS PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 43/95 (45.26%), Postives = 60/95 (63.16%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAI-GRKVEDLLADPENKE 284 HV Q GS+V P++LRFDF+H +P+ PE L R+E +VN I A+ V + L EA++ G A+FGE Y + VRVV + G +E L E+KE Sbjct: 591 HVRQAGSLVAPDRLRFDFTHPEPLKPEELERVELLVNRWIMADFPVTWRYMPLEEARK-EGAMALFGEKYGEVVRVVRVEGSPLEGL----ESKE 680
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_THET2 (Alanyl-tRNA synthetase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=alaS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 43/95 (45.26%), Postives = 60/95 (63.16%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAI-GRKVEDLLADPENKE 284 HV Q GS+V P++LRFDF+H +P+ PE L R+E +VN I A+ V + L EA++ G A+FGE Y + VRVV + G +E L E+KE Sbjct: 591 HVRQAGSLVAPDRLRFDFTHPEPLKPEELERVELLVNRWIMADFPVTWRYMPLEEARK-EGAMALFGEKYGEVVRVVRVEGSPLEGL----ESKE 680
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_RHOPB (Alanyl-tRNA synthetase OS=Rhodopseudomonas palustris (strain BisB18) GN=alaS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGR 245 H+ QKGS+V ++LRFDF H KP+ + LRR+E I NE + +V ++ + +A+ G RA+FGE Y D VRVV +G+ Sbjct: 581 HIAQKGSLVAEDRLRFDFVHQKPISADELRRVEDIANEVVLENDEVTTRLMAVDDAREA-GARALFGEKYGDEVRVVTMGK 660
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_PSEA7 (Alanyl-tRNA synthetase OS=Pseudomonas aeruginosa (strain PA7) GN=alaS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 37/80 (46.25%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V ++LRFDFSH + + PE L+ +E IVN +I+ +V ++E + AK G A+FGE Y D VRV+++G Sbjct: 579 HVQQKGSLVDSQRLRFDFSHFEAIKPEQLKALEDIVNAEIRRNTEVETEETDIDTAK-AKGAMALFGEKYGDQVRVLSMG 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_PELUB (Alanyl-tRNA synthetase OS=Pelagibacter ubique GN=alaS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V ++LRFDFSH KP+ E +R+IE VN I+ + +V ++ T EA NG A+FGE Y D VRV+++G Sbjct: 581 HVTQKGSLVQSDRLRFDFSHMKPISDEEIRKIEHYVNSIIEKKSEVKTRIMTPKEAVE-NGALALFGEKYGDEVRVLSMG 659
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_STAES (Alanyl-tRNA synthetase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=alaS PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVV 233 HV+Q GS+V PE+LRFDFSH P+ E + +E VNE+I +DV +E ++ EAK I G A+FGE Y D VRVV Sbjct: 582 HVNQAGSLVEPERLRFDFSHFGPMTQEEINLVERRVNEEIWRAIDVRIQEMSIEEAKSI-GAMALFGEKYGDIVRVV 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_STAEQ (Alanyl-tRNA synthetase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=alaS PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVV 233 HV+Q GS+V PE+LRFDFSH P+ E + +E VNE+I +DV +E ++ EAK I G A+FGE Y D VRVV Sbjct: 582 HVNQAGSLVEPERLRFDFSHFGPMTQEEINLVERRVNEEIWRAIDVRIQEMSIEEAKSI-GAMALFGEKYGDIVRVV 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_MARAV (Alanyl-tRNA synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=alaS PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 41/80 (51.25%), Postives = 50/80 (62.50%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V P+KLRFDFSH + V PE LR IE VNEQI V + T + + G A+FGE Y D VRV+ +G Sbjct: 579 HVTQKGSLVDPDKLRFDFSHFEAVTPEQLREIERTVNEQILENTPV-DIDITDMDTAKEKGAMALFGEKYGDVVRVLTMG 657 The following BLAST results are available for this feature:
BLAST of CX288293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288293 ID=CX288293; Name=CX288293; organism=Citrus clementina; type=EST; length=682bpback to top |