CX288298

Overview
NameCX288298
Unique NameCX288298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length749
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 5.818e-77
Identity = 144/206 (69.90%), Postives = 164/206 (79.61%), Query Frame = 1
Query:  154 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMG--------VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHLA 747
            KDY +PPPAPL +  EL  WS YRA IAEFIAT LFLYI+V TV+G        V  ++  CS VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RA+ Y++ QCLGAICG G+VKGF  +  Y R  GGAN ++ GY+KG GLGAEIIGTFVLVYTVFSATD KR+ARDSH+P+L  LPIGFAVF+VHLA
Sbjct:   18 KDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQ-SSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLA 222          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 9.924e-77
Identity = 145/213 (68.08%), Postives = 164/213 (77.00%), Query Frame = 1
Query:  133 AAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS--------NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHLA 747
            AA   +GKDY +PPPAPL +  EL  WS YRA IAEF+AT LFLYI+V TV+G            +  C  VG+ GIAWAFGGMIF+LVYCTAG+SGGHINPAVT GLFLARK+SL RAL Y+V QCLGAICG G+VKGF  A  Y R  GGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+L  LPIGFAVF+VHLA
Sbjct:    7 AAAAHEGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSA-FYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLA 218          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.296e-76
Identity = 147/215 (68.37%), Postives = 162/215 (75.35%), Query Frame = 1
Query:  127 GTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS--------NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHLA 747
            G  A     KDY +PPPAPL +  EL  WS YRA IAEFIAT LFLYI+V TV+G            +  C  VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RAL Y++ QCLGAICG G+VKGF  A  Y R  GGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KRSARDSHVP+L  LPIGFAVF+VHLA
Sbjct:   10 GPEAGEFSAKDYTDPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSA-YYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLA 223          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.693e-76
Identity = 147/215 (68.37%), Postives = 162/215 (75.35%), Query Frame = 1
Query:  127 GTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS--------NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHLA 747
            G  A     KDY +PPPAPL +  EL  WS YRA IAEFIAT LFLYI+V TV+G            +  C  VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RAL Y++ QCLGAICG G+VKGF  A  Y R  GGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KRSARDSHVP+L  LPIGFAVF+VHLA
Sbjct:    9 GPEAGEFSAKDYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSA-YYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLA 222          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.693e-76
Identity = 146/215 (67.91%), Postives = 164/215 (76.28%), Query Frame = 1
Query:  127 GTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--------SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHLA 747
            G AA     KDY +PPPAPL +  EL SWS YRA IAEFIAT LFLYI+V TV+G           ++  C  VG+ GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RA+ Y+V QCLGAICG G+VK F  A  + R  GGAN +A GY+KG GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+L  LPIGFAVF+VHLA
Sbjct:   10 GGAAGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSA-YFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLA 223          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 1.693e-76
Identity = 145/206 (70.39%), Postives = 162/206 (78.64%), Query Frame = 1
Query:  154 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--------SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHLA 747
            KDY +PPPAPL +  EL SWS YRA IAEFIAT LFLYI+V TV+G           ++  C  VG+ GIAWAFGGMIFVLVYCTAGISGGHINPAVT GLFLARK+SL RAL Y+V QCLGAICG G+VK F  A  + R  GGAN +A GY++G GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+L  LPIGFAVF+VHLA
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSA-YFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLA 223          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 2.211e-76
Identity = 145/204 (71.08%), Postives = 163/204 (79.90%), Query Frame = 1
Query:  154 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-VKSNTK-----CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHLA 747
            +DY +PPPAP  +  ELK WSFYRA IAEF+AT LFLYI+VLTV+G  ++S+T      C  VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RAL Y++ QCLGAICG G VK F  +  Y R  GGAN +A GY+ G GL AEIIGTFVLVYTVFSATD KRSARDSHVP+L  LPIGFAVF+VHLA
Sbjct:   16 RDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVIGYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAFQ-SSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLA 218          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.887e-76
Identity = 143/208 (68.75%), Postives = 162/208 (77.88%), Query Frame = 1
Query:  154 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV----------VKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHLA 747
            KDY +PPPAPL +  EL SWS YRA IAEFIAT LFLY++V TV+G             ++  C  VG+ GIAWAFGGMIFVLVYCTAGISGGHINPAVT GLFLARK+SL RAL YMV QCLGA+CG G+VK F  A  + R  GGAN +A GY++G GLGAEI+GTFVLVYTVFSATD KR+ARDSHVP+L  LPIGFAVF+VHLA
Sbjct:   19 KDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSA-YFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLA 225          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 6.432e-76
Identity = 144/200 (72.00%), Postives = 161/200 (80.50%), Query Frame = 1
Query:  154 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMG--VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHLA 747
            KDY +PPPAPLF+ GEL+ WSFYRA IAEFIAT LFLYI+V TV+G  V  S  +C  VG  GIAWAFGGMIF+LVYCTAGISGGHINPAVT GL LARK+S+ RA+ Y+V QCLG I G G+VKG M   QY    GGAN+VA GY+ G  LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+L  LPIGFAVF+VHLA
Sbjct:   15 KDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIM-KHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLA 213          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 283.493 bits (724), Expect = 8.401e-76
Identity = 144/204 (70.59%), Postives = 161/204 (78.92%), Query Frame = 1
Query:  154 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-VKSNTK-----CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHLA 747
            +DY +PPP P F+  EL  WS YRA IAEF+AT LFLYI+VLTV+G  ++S+TK     C  VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RA+ YMV QCLGAICG G VK F  +  Y R  GGAN +A GY  G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+L  LPIGFAVF+VHLA
Sbjct:   14 RDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQ-SSYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLA 216          
The following BLAST results are available for this feature:
BLAST of CX288298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
PIP22_ORYSJ5.818e-7769.90Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP25_MAIZE9.924e-7768.08Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP23_MAIZE1.296e-7668.37Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP24_MAIZE1.693e-7668.37Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP21_ORYSJ1.693e-7667.91Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP21_MAIZE1.693e-7670.39Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP21_ARATH2.211e-7671.08Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP22_MAIZE2.887e-7668.75Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP26_ORYSJ6.432e-7672.00Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP22_ARATH8.401e-7670.59Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]

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Properties
Property NameValue
Genbank descriptionC01018H06SK Veg1 Citrus clementina cDNA clone C01018H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288298 ID=CX288298; Name=CX288298; organism=Citrus clementina; type=EST; length=749bp
GGCACAAACAAAAAAGCAAGTGCTTCTTATTGACTGTTTTGTGTTTTTGA
GGGACTAGCAGAAATGGAAGGTAAAGAAGAGGATGTTAGACTGGGAGCCA
ACAAGTTCGCCGAGAGGCAGCCGATTGGGACGGCGGCTCAGACCCAAGAT
GGGAAGGACTACGTTGAGCCCCCACCGGCGCCGCTCTTTGAGCCCGGCGA
GCTCAAGTCTTGGTCGTTTTACAGGGCCGGTATAGCCGAGTTCATAGCCA
CTTTTCTTTTCTTGTACATCTCCGTACTGACAGTGATGGGCGTCGTCAAG
TCCAATACCAAGTGCTCAACCGTCGGCATTCAAGGGATTGCATGGGCCTT
CGGTGGCATGATCTTCGTGCTCGTTTACTGCACAGCTGGCATCTCGGGTG
GTCATATCAACCCGGCGGTGACACTCGGCCTGTTCTTGGCGAGGAAGCTG
TCGCTGACACGTGCACTTTTCTACATGGTGATGCAGTGTCTGGGAGCCAT
CTGCGGTGCTGGCGTTGTAAAGGGTTTCATGGGTGCCGGCCAATACGGGC
GGCTCGCCGGCGGTGCCAACGTCGTAGCTCATGGCTACACCAAGGGTGAT
GGTCTTGGTGCCGAGATTATTGGTACTTTTGTTCTTGTCTACACAGTTTT
CTCTGCCACTGATGCCAAACGGAGCGCCAGGGACTCTCATGTTCCTATTT
TGGGCTCTCTGCCAATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCTAC
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