CX288298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.704e-23 Identity = 69/177 (38.98%), Postives = 101/177 (57.06%), Query Frame = 1 Query: 214 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHL 744 +F++A AEF+A +F+ +SV + + S V + I+ FG I +V C ISGGHINPAVT+ + RK+S+ +++FY+ QCLGAI GAG++ G L G V T G GL E+I TF LV+T+F++ D+KR+ V +L IGF+V + HL Sbjct: 33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSV----ALAIGFSVAIGHL 202
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.837e-23 Identity = 68/177 (38.42%), Postives = 101/177 (57.06%), Query Frame = 1 Query: 214 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHL 744 +F++A AEF+A +F+ +SV + + S V + I+ FG I +V C ISGGHINPAVT+ + RK+S+ +++FY+ QCLGAI GAG++ G L G V T G GL E+I TF LV+T+F++ D+KR+ + +L IGF+V + HL Sbjct: 36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFSVAIGHL 205
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 8.251e-23 Identity = 67/177 (37.85%), Postives = 102/177 (57.63%), Query Frame = 1 Query: 214 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHL 744 +F++A AEF+A +F+ +S+ + + K V + I+ FG I +V C ISGGHINPAVT+ + RK+S+ +++FY+ QCLGAI GAG++ G L G +V T G GL E+I TF LV+T+F++ D+KR+ + +L IGF+V + HL Sbjct: 33 AFWKAVTAEFLAMLIFVLLSLGSTINW-GGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFSVAIGHL 202
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.407e-22 Identity = 69/178 (38.76%), Postives = 102/178 (57.30%), Query Frame = 1 Query: 214 SFYRAGIAEFIATFLFLYISV-LTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHL 744 +F++A AEF+A +F+ +S+ T+ K N V + I+ FG I +V C ISGGHINPAVT+ + RK+S+ +++FY+ QCLGAI GAG++ G L G V T G GL E+I TF LV+T+F++ D+KR+ + +L IGF+V + HL Sbjct: 33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPL--PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFSVAIGHL 202
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.985e-22 Identity = 68/183 (37.16%), Postives = 102/183 (55.74%), Query Frame = 1 Query: 199 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI-LGSLPIGFAVFLVHL 744 E+ S +F +A AEF+AT +F++ + + + + I IA AFG I L +SGGHINPA+TL L + ++SL RA+FY+V Q +GAI GAG++ G G LA N + + T G + E+I TF L +FS+TD++R++ P+ +L IG +V L HL Sbjct: 4 EVCSLAFLKAVFAEFLATLIFVFFGLASAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLA--VNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHL 174
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 4.528e-21 Identity = 64/177 (36.16%), Postives = 101/177 (57.06%), Query Frame = 1 Query: 214 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHL 744 +F++A AEF+A +F+ +S+ + + + K V + I+ FG I +V C ISGGHINPAVT+ + R++S+ +++FY+ QCLGAI GAG++ G L G V + G GL E+I TF LV+T+F++ D+KR+ + +L IG +V + HL Sbjct: 33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGISVAIGHL 202
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.913e-21 Identity = 70/183 (38.25%), Postives = 99/183 (54.10%), Query Frame = 1 Query: 199 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS-NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHL 744 EL+S SF+RA +AEF+ + L+ T++G+ S G+ G A AFG LV +SGGHINPA+TL LA +LSL RAL Y++ Q LGA+ GAGV+ G A G L G + + G G E++ T + VF++ D + R P +LP+GF++ L HL Sbjct: 3 ELRSSSFWRAILAEFLGSLLY------TLLGLGASLRWAPGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTL--GLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHL 173
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.913e-21 Identity = 66/183 (36.07%), Postives = 101/183 (55.19%), Query Frame = 1 Query: 199 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI-LGSLPIGFAVFLVHL 744 E+ S +F +A AEF+AT +F++ + + + + I IA AFG I L +SGGHINPA+TL L + ++SL RA FY+ Q +GAI GAG++ G G LA N + + T+G + E+I TF L +F++TD++R++ P+ +L IG +V L HL Sbjct: 4 EVCSVAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA--VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHL 174
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.723e-21 Identity = 65/183 (35.52%), Postives = 102/183 (55.74%), Query Frame = 1 Query: 199 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI-LGSLPIGFAVFLVHL 744 E+ S +F++A AEF+AT +F++ + + + + I I+ AFG I L +SGGHINPA+TL L + ++SL RA+FY+ Q +GAI GAG++ G LA N +++ T G + E+I TF L +FS+TD++R++ P+ +L IG +V L HL Sbjct: 4 EVCSVAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNLA--VNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHL 174
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.720e-20 Identity = 65/183 (35.52%), Postives = 101/183 (55.19%), Query Frame = 1 Query: 199 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI-LGSLPIGFAVFLVHL 744 E+ S +F++A AEF+AT +F++ + + + + I I+ AFG I L +SGGHINPA+TL L + ++SL RA+FY+ Q +GAI GAG++ G LA N + + T G + E+I TF L +FS+TD++R++ P+ +L IG +V L HL Sbjct: 4 EVCSLAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNLA--VNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHL 174 The following BLAST results are available for this feature:
BLAST of CX288298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288298 ID=CX288298; Name=CX288298; organism=Citrus clementina; type=EST; length=749bpback to top |