CX288298

Overview
NameCX288298
Unique NameCX288298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length749
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.538e-20
Identity = 64/183 (34.97%), Postives = 101/183 (55.19%), Query Frame = 1
Query:  199 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI-LGSLPIGFAVFLVHL 744
            E+ S +F +A  AEF+AT +F++  + + +         +   +  I+ AFG  I  +      +SGGH+NPA+TL L +  ++SL RA+FY+V Q +GAI GA ++ G         LA   N + +  T G  + AE+I TF L   VFS+TD++R++     P+   +L IG +V L HL
Sbjct:    4 EVCSAAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSAMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARSNLA--VNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHL 174          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.115e-19
Identity = 67/182 (36.81%), Postives = 96/182 (52.75%), Query Frame = 1
Query:  199 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHL 744
            EL+S +F RA  AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     ISG HINPAVT+   +   +S+ RA FY+  Q LGA+ GA ++     A   G LA   N +++  T G  +  E+  T  LV  +F++TD +R       P   +L IGF+V L HL
Sbjct:    3 ELRSIAFSRAVFAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLA--VNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSVALGHL 173          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.902e-19
Identity = 63/182 (34.62%), Postives = 91/182 (50.00%), Query Frame = 1
Query:  199 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHL 744
            E +S+SF+RA  AEF  T  +++  +   +             +  IA AFG ++  +V     +SG HINPAVT    +  ++SL RA+FY+  Q LGA+ GA V+ G   A   G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V    SL IGF++ L HL
Sbjct:    3 EFRSFSFWRAVFAEFFGTMFYVFFGLGASL-----KWAAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNLA--LNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHL 173          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.902e-19
Identity = 65/182 (35.71%), Postives = 95/182 (52.20%), Query Frame = 1
Query:  199 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHL 744
            EL+S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT+   +   +S  RA+FY+  Q LGA+ GA ++         G LA   N + +  T G  +  E+  T  LV  +F +TD +R  +  H     +L IGF+V L HL
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLA--VNALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHL 173          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.440e-19
Identity = 67/185 (36.22%), Postives = 97/185 (52.43%), Query Frame = 1
Query:  196 GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILGSLPIGFAV 729
            G+  S S  +A ++EFIAT LF++  V + +   K  S+      G+  IA A    +FV V   A ISGGH+NPAVTLGL +   ++L    FY + QCLG+I    ++           +  G +V  HG + G    +G+  EI+ TF LVYTV+ +A D K+ +  +  PI     IGF V
Sbjct:   10 GDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLLV---------FVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPI----AIGFIV 181          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 9.440e-19
Identity = 68/184 (36.96%), Postives = 95/184 (51.63%), Query Frame = 1
Query:  199 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGS--LPIGFAVFLVHL 744
            EL+S +F RA +AEF+AT LF++  + + +         S   +  IA AFG  I  LV     +SG HINPAVT+   +   +S  RA FY+  Q LGA+ GA ++         G LA   N + +  T G  +  E+  T  LV  +F++TD +RS        LGS  L IGF+V L HL
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----QWASSPPSVLQIAVAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLA--VNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRSDN------LGSPALSIGFSVTLGHL 173          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.233e-18
Identity = 67/184 (36.41%), Postives = 95/184 (51.63%), Query Frame = 1
Query:  199 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGS--LPIGFAVFLVHL 744
            EL+S +F RA +AEF+AT LF++  + + +         S   +  IA AFG  I +LV     +SG HINPAVT+   +   +S  RA FY+  Q LGA+ GA ++         G LA   N + +  T G  +  E+  T  LV  +F++TD +R         LGS  L IGF+V L HL
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----QWASSPPSVLQIAVAFGLGIGILVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLA--VNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRGDN------LGSPALSIGFSVTLGHL 173          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.610e-18
Identity = 62/169 (36.69%), Postives = 92/169 (54.44%), Query Frame = 1
Query:  223 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILGSLPIG 720
            RA +AEFI+T LF++  V + +   K  S+    T G+  IA   G  +FV V   A ISGGH+NPAVT GL +  ++++   +FY + Q LG+     ++K   G      LA   + VA G    +G+  EII TF LVYTV+ +A D K+ +  +  P+   L +G
Sbjct:   19 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGG-----LAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVG 182          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.610e-18
Identity = 64/182 (35.16%), Postives = 94/182 (51.65%), Query Frame = 1
Query:  199 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILGSLPIGFAVFLVHL 744
            EL+S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT+   +   +S  RA+FY+  Q LGA+ GA ++         G LA   N + +  T G  +  E+  T  LV  +F++TD +R           +L IGF+V L HL
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLA--VNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRGDNVG----TPALSIGFSVALGHL 173          
BLAST of CX288298 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.103e-18
Identity = 64/185 (34.59%), Postives = 97/185 (52.43%), Query Frame = 1
Query:  196 GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILGSLPIGFAV 729
            G+  S +  +A +AEFIAT LF++  V + +   K  S+      G+  +A A    +FV V   A +SGGH+NPAVTLGL +   +++   LFY + QCLG+     ++K          +  G +V  HG   G     G+  EII TF LVYTV+ +A D K+ +    + ++  + IGF V
Sbjct:   10 GDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLK---------FVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGS----LGVIAPIAIGFIV 181          
The following BLAST results are available for this feature:
BLAST of CX288298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
AQP5_SHEEP6.538e-2034.97Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP2_HUMAN1.115e-1936.81Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
MIP_RANPI1.902e-1934.62Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQP2_SHEEP1.902e-1935.71Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
TIP23_ARATH9.440e-1936.22Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
AQP2_MOUSE9.440e-1936.96Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
AQP2_RAT1.233e-1836.41Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
TIP21_ARATH1.610e-1836.69Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
AQP2_BOVIN1.610e-1835.16Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
TIP_ANTMA2.103e-1834.59Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]

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Properties
Property NameValue
Genbank descriptionC01018H06SK Veg1 Citrus clementina cDNA clone C01018H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288298 ID=CX288298; Name=CX288298; organism=Citrus clementina; type=EST; length=749bp
GGCACAAACAAAAAAGCAAGTGCTTCTTATTGACTGTTTTGTGTTTTTGA
GGGACTAGCAGAAATGGAAGGTAAAGAAGAGGATGTTAGACTGGGAGCCA
ACAAGTTCGCCGAGAGGCAGCCGATTGGGACGGCGGCTCAGACCCAAGAT
GGGAAGGACTACGTTGAGCCCCCACCGGCGCCGCTCTTTGAGCCCGGCGA
GCTCAAGTCTTGGTCGTTTTACAGGGCCGGTATAGCCGAGTTCATAGCCA
CTTTTCTTTTCTTGTACATCTCCGTACTGACAGTGATGGGCGTCGTCAAG
TCCAATACCAAGTGCTCAACCGTCGGCATTCAAGGGATTGCATGGGCCTT
CGGTGGCATGATCTTCGTGCTCGTTTACTGCACAGCTGGCATCTCGGGTG
GTCATATCAACCCGGCGGTGACACTCGGCCTGTTCTTGGCGAGGAAGCTG
TCGCTGACACGTGCACTTTTCTACATGGTGATGCAGTGTCTGGGAGCCAT
CTGCGGTGCTGGCGTTGTAAAGGGTTTCATGGGTGCCGGCCAATACGGGC
GGCTCGCCGGCGGTGCCAACGTCGTAGCTCATGGCTACACCAAGGGTGAT
GGTCTTGGTGCCGAGATTATTGGTACTTTTGTTCTTGTCTACACAGTTTT
CTCTGCCACTGATGCCAAACGGAGCGCCAGGGACTCTCATGTTCCTATTT
TGGGCTCTCTGCCAATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCTAC
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