CX288388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288388 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.182e-27 Identity = 90/269 (33.46%), Postives = 136/269 (50.56%), Query Frame = 3 Query: 72 IQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALVNR-----IDRASYPKNSTY---NRRLDE----------EQGDFPNWVSAKNRKLLQAPRINANVIVAQDG-------TGNYRTVSEAISAASGNRF------VIYVKAGVYKEK--IRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDI 779 + + LG +T QQTC D + + A++ I + L++L S L LV+ + R K + N+ + E + D NR L + + I+ ++ T N+ T++EA++AA + F VIY +AG+Y+E I K I LIGDG TII+G+ + G + ++TF + GD F+A D+ F NTAGP+ QA+A+ +D + FYRCS GYQDTLY +LRQFYR+ DI Sbjct: 190 VTSLLGGVVTNQQTCLDGL----VDAKSGFATAIGTPLGNLTRLYSVSLGLVSHALNRNLKRYKGSKGKIFGGGNKPVREPLETLIKVLRKTCDKGKDCRKANRNLGELGETSGGSILVREAVTVGPYETDNFPTITEAVAAAPNHTFPEQGYFVIYARAGLYEEYVVISNKKRNIMLIGDGINKTIISGNHSFIDGWTTYNSSTFAVVGDRFVAVDVTFRNTAGPEKHQAVAVRNNADGSTFYRCSFEGYQDTLYVHSLRQFYRECDI 454
BLAST of CX288388 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.491e-27 Identity = 66/145 (45.52%), Postives = 90/145 (62.07%), Query Frame = 3 Query: 360 NVIVAQDGTGNYRTVSEAISAASGN---RFVIYVKAGVYKEKIRTNKDGITL--IGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDI 779 +V+VA+DG+GN+ TV A++AA + RFVIY+K G Y E + +K L IGDG T I G+ + G + ++T + G GFIAR I F N AGP QA+AL +D + FY+CS GYQDTLY +LRQFY + D+ Sbjct: 9 DVVVAKDGSGNFTTVGAAVAAAKDSSTARFVIYIKEGAYFEYVDVDKKKTNLMFIGDGIGKTWIKGNRSVVDGWTTFRSSTVAVVGTGFIARGISFENYAGPSKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECDV 153
BLAST of CX288388 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.035e-23 Identity = 81/251 (32.27%), Postives = 125/251 (49.80%), Query Frame = 3 Query: 69 DIQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALVNRIDR-----ASYPKNSTYNRRLDEEQGDFPNWVSAKNRKLLQAPRINANVIVAQDGTGN--YRTVSEAISAASGN----RFVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARR-GTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDI 779 D + W+ AAL +Q C + ++ + +V+ I+ + L LT N L+++ D S+ + +T E+ G + L + +V V ++G + Y+TV EA+ +A +FVI ++ GVY+E +R K + IGDG T+ITG N + G + +AT + GDGF+ARD+ NTAG QA+A SD +V C G QDTLYA +LRQFY+ I Sbjct: 189 DARAWMSAALAYQFDCWSGLKTV--NDTKQVVDTITF-FEGLVNLTGNALSMMLSFDSFGDDVVSWIRPATERDGFWEKAGPSLGSGTGTEASLGFPSGLTEDVTVCKNGGKDCKYKTVQEAVDSAPDTNRTVKFVIRIREGVYEETVRVPFEKKNVVFIGDGMGKTVITGSLNVGQPGMTTFESATVGVLGDGFMARDLTIENTAGADAHQAVAFRSDSDFSVLENCEFLGNQDTLYAHSLRQFYKQCRI 436
BLAST of CX288388 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.495e-22 Identity = 66/165 (40.00%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 303 PNWVSAKNRKLL----QAPRINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKE--KIRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRD 770 P+W+S ++K L + + +++VA+D TGNY V+ AI+AA S RFVIY+K +Y E I K +TLI DG+ +TIIT + ++ TATF GDGFI D+ F NT P + L V D ++ YRC + YQD LY RQ YR+ Sbjct: 54 PSWLSHVDKKDLYLNDETLKKITDILVAKDVTGNYNIVNVAIAAAPQHSQKRFVIYIKTSIYVEIVVIGNMKSNLTLIADGQDSTIITFNLSSSNSKRTFNTATFASNGDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYRE 218
BLAST of CX288388 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.147e-14 Identity = 52/151 (34.44%), Postives = 80/151 (52.98%), Query Frame = 3 Query: 363 VIVAQDGTGNYRTVSEAI-SAASGN--RFVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARR----------GTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRD 770 V V+QDG+G+Y +V +AI S GN R VI + G+Y++ + K+ IT G T++T ++ A + GT G + + G+ FIA +I F N+A QA+A+ V +D FY C G+QDTLY +Q+ +D Sbjct: 7 VRVSQDGSGDYCSVQDAIDSVPLGNTCRTVIRLSPGIYRQPVYVPKRKNFITFAGISPEITVLTWNNTASKIEHHQASRVIGTGTFGCGSVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKD 157
BLAST of CX288388 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.691e-13 Identity = 51/144 (35.42%), Postives = 72/144 (50.00%), Query Frame = 3 Query: 369 VAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEK--IRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTA-----GPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRD 770 V ++G N+ TV A+ A S R VI++ +G+Y EK I K ITL G G T I +D A AT + G F+A++I F N A G G QA+A+ +A D + F C G QDTL+ R +++D Sbjct: 93 VDKNGCCNFTTVQSAVDAVGNFSQRRNVIWINSGMYYEKVVIPKTKPNITLQGQGFDITAIAWNDTAYSANGTFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKD 236
BLAST of CX288388 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.691e-13 Identity = 53/162 (32.72%), Postives = 80/162 (49.38%), Query Frame = 3 Query: 306 NWVSAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISA---ASGNRFVIYVKAGVYKEKIRT--NKDGITLIGDGKYT--TIITGDDNAR------RGTSMPGTATFTITGDGFIARDIGFHNT----AGPQGEQALALNVASDHTVFYRCSIAGYQDTLY 740 NWV+ A + ++V ++G G+ TV A+ ++ R I++ G+Y+EK+ +K I+ IG+ Y T+I+ D A + TA+ +I D F A I F NT AG QG QA+AL + D VFYR + G QDTL+ Sbjct: 63 NWVTTNANANANATNVRRVIVVDKNGGGDSVTVQGAVDMVPDSNSQRVKIFILPGIYREKVIVPKSKPYISFIGNESYAGDTVISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLF 224
BLAST of CX288388 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.820e-13 Identity = 61/198 (30.81%), Postives = 97/198 (48.99%), Query Frame = 3 Query: 261 STYNRRLDEEQGDFPNWV------------SAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRTN--KDGITLIGDGKYTTIITGDDNAR----RGTSMP--GTATFTITGDGFIARDIGFHNTA-----GPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRD 770 +T + R + +F WV +AKN KL + + + + G++ + +AI + + R VI V AGVYKEK+ K IT+ G+G T + D A+ +G M +A+F + F+A++I F NT G G+QA+AL V++D+ F+ C + G QDTLY R +Y+D Sbjct: 44 NTTSDRTQNPEDEFMKWVRFVGSLKHSVFKAAKN-KLFPSYTLTVH---KKSNKGDFTKIQDAIDSLPLINFVRVVIKVHAGVYKEKVSIPPLKAFITIEGEGAEKTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKD 237
BLAST of CX288388 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.402e-12 Identity = 50/147 (34.01%), Postives = 80/147 (54.42%), Query Frame = 3 Query: 360 NVIVAQDGTGNYRTVSEAI-SAASGN--RFVIYVKAGVYKEKIRTN--KDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGP-----QGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRD 770 N V Q+G G+++T++EAI S +GN R +I + GVYKEK+ + K ITL G ++T D A + ++ +AT + D F+A +I N+A +G QAL++ ++ + FY C GYQDT+ F++D Sbjct: 42 NTNVKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPGVYKEKVTIDRSKPFITLYGHPNAMPVLTFDGTAAQYGTVD-SATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKD 187
BLAST of CX288388 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.187e-11 Identity = 46/150 (30.67%), Postives = 79/150 (52.67%), Query Frame = 3 Query: 354 NANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQG------EQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRD 770 N ++IV +G G+Y +V +AI A + N +++V+ G+YKE++ NK I + G+GK T+I ++++ +ATF + + F+A I N A P G Q++A VA+D FY C+ +TL+ R +Y + Sbjct: 43 NRSIIVDIEGKGDYTSVQKAIDAVPVGNSNWIIVHVRKGIYKERVHIPENKPFIFMRGNGKGKTVI---ESSQSSVDNVASATFKVEANHFVAFGISIRNDA-PVGMAFTSENQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHE 188 The following BLAST results are available for this feature:
BLAST of CX288388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288388 ID=CX288388; Name=CX288388; organism=Citrus clementina; type=EST; length=781bpback to top |