CX288415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288415 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18 Identity = 62/157 (39.49%), Postives = 81/157 (51.59%), Query Frame = 1 Query: 151 IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKT----CATSLESMLDFAGSIFGSETGFKT---VTTKSTSNTFQNYTILEVQ--EIPASKMVACHYMSYPYAIYGCH 594 +FF +DL G+KM L+ + A LPR A+S PF+ ++LP IL SIP VSP A AM TL CE + E CATSLESM++F S G+ V + T Q Y + V+ +P MVACH M Y YA++G H Sbjct: 64 VFFLEKDLFPGSKMTLHFTRA--TAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECEAARLAGETTKHKHYCATSLESMVEFVASSLGTRDVHAVSTEVISTLTPTPRQAYRVEAVRPVAVPGGDMVACHGMPYAYAVFGLH 218
BLAST of CX288415 vs. ExPASy Swiss-Prot
Match: GP1_SOLLC (Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum GN=GP1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.953e-17 Identity = 61/188 (32.45%), Postives = 86/188 (45.74%), Query Frame = 1 Query: 154 FFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEI---PASKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNG--DIADAISACHLDTSQW 702 FF + LK G M + I+D FLPR A PFS ++ + ++ S K + D L CE P E K C S E M+DFA S+ G + TT+ T + N I V+ I +K V+CH YPY +Y CHS +V+ ++ N I ++ CH+DTS W Sbjct: 415 FFREKMLKSGTIMPMP-DIKDKMPKRSFLPRVIASKLPFSTSKIAELKKIFHAGDESQVEKMIGDALSECERAPSAGETKRCVNSAEDMIDFATSVLGRNVVVR--TTEDTKGSNGNIMIGSVKGINGGKVTKSVSCHQTLYPYLLYYCHSVPKV---RVYEADILDPNSKVKINHGVAICHVDTSSW 596
BLAST of CX288415 vs. ExPASy Swiss-Prot
Match: BURPC_ORYSJ (BURP domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=BURP12 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.953e-17 Identity = 58/192 (30.21%), Postives = 91/192 (47.40%), Query Frame = 1 Query: 136 SSEVKIFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFK-TVTTKSTSNTFQNYTILEVQEIPASKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGD--IADAISACHLDTSQW 702 S E FF +L GN M + I+D FLPR+ A PF + E+ +P + KA+ T+ CE P + E K CATS E ++DFA + G++ + T +T + + + V ++ V+CH +PY +Y CHS +V+ ++ + D I ++ CHLDTS W Sbjct: 409 SPEPGKFFRETELVSGNTMPMP-DIKDKMPPRAFLPRDIAKKIPFKPNA---VSEVFGVPLDTAMGKAVTSTVAECERAPSRGETKRCATSAEDIVDFAVEMLGNDIVVRSTASTAGSGGQIRLGNVTGVDGGKVTRSVSCHQSLFPYLVYYCHSVPKV---RVYEADIMAADSDQKINHGVAICHLDTSDW 593
BLAST of CX288415 vs. ExPASy Swiss-Prot
Match: GP3_SOLLC (Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum GN=GP3 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16 Identity = 60/188 (31.91%), Postives = 88/188 (46.81%), Query Frame = 1 Query: 154 FFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEI---PASKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDN--GDIADAISACHLDTSQW 702 FF + LK G M + I+D FLPR A PFS ++ + ++ S AK + D L CE P E K C S E M+DFA S+ G + TT++T+ + N I ++ I +K V+CH YP +Y CHS +V+ ++ N I ++ CH+DTS W Sbjct: 417 FFREKMLKSGTIMPMP-DIKDKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVR--TTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKV---RVYEADILDPNSKAKINHGVAICHVDTSSW 598
BLAST of CX288415 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16 Identity = 60/188 (31.91%), Postives = 88/188 (46.81%), Query Frame = 1 Query: 154 FFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEI---PASKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDN--GDIADAISACHLDTSQW 702 FF + LK G M + I+D FLPR A PFS ++ + ++ S AK + D L CE P E K C S E M+DFA S+ G + TT++T+ + N I ++ I +K V+CH YP +Y CHS +V+ ++ N I ++ CH+DTS W Sbjct: 414 FFREKMLKSGTIMPMP-DIKDKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVR--TTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKV---RVYEADILDPNSKAKINHGVAICHVDTSSW 595
BLAST of CX288415 vs. ExPASy Swiss-Prot
Match: BURPE_ORYSJ (BURP domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=BURP14 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16 Identity = 60/193 (31.09%), Postives = 89/193 (46.11%), Query Frame = 1 Query: 136 SSEVKIFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEIPA----SKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGDIADAISACHLDTSQW 702 S E FF RDL GN+M + I D + FLPR+ A PF + L + + + T+ C P + E K CATS E ++DFA + G + T+ST+ + + V +PA ++ V+CH +PY +Y CHS T + + + V N I ++ CHLDTS W Sbjct: 471 SPEPGKFFRERDLVAGNRMPMP-DIADRTPPRAFLPRDIAAKIPFDAAA---VSALFGAAPGTAMRQVVSSTVAECARPPSRGETKRCATSAEDVVDFAVEMLGDNVVAR--ATESTAGGGGDVRLGRVAGVPAGGNVTRSVSCHQSLFPYLVYYCHSVPTVRVYEA-DILAVDSNQKINHGVAICHLDTSDW 656
BLAST of CX288415 vs. ExPASy Swiss-Prot
Match: BURPG_ORYSJ (BURP domain-containing protein 16 OS=Oryza sativa subsp. japonica GN=BURP16 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16 Identity = 57/188 (30.32%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 151 IFFTLRDLKVGNKMALY-LPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEIPASKM---VACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGDIADAISACHLDTSQW 702 IFF ++LK GN + + + E + + FLPR AD PF + + L + + AKA+++T+ C++ P K E K C TS E M+DFA ++ G + + +T + ++ I +V+ I K+ V+CH +PY +Y CHS + + + V I ++ CH+DTS W Sbjct: 127 IFFREQELKEGNVVRMPDIANELTTARSSFLPRSIADRIPFKAEA---VKSLFGLEPNTTLAKAVDETVAQCQSSPSKGETKRCVTSAEDMIDFAVAMLGDDIVVR--STVLPNGPGESIMIGKVKGINGGKITSSVSCHEYLFPYMVYYCHSVPKIRVYEA-EILSVQTKEKINSGVAICHIDTSAW 308
BLAST of CX288415 vs. ExPASy Swiss-Prot
Match: JP650_ARATH (Probable polygalacturonase non-catalytic subunit JP650 OS=Arabidopsis thaliana GN=JP650 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15 Identity = 57/186 (30.65%), Postives = 81/186 (43.55%), Query Frame = 1 Query: 154 FFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEIPASKM---VACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGDIADAISACHLDTSQW 702 FF LK G + + I+D FLPR PFS +L I + S + D + CE P E K C S E M+DFA S+ G + TT++ + + + I +V I K+ V+CH YPY +Y CHS + + + L I I+ CH+DTS W Sbjct: 411 FFRESSLKEGTVIPMP-DIKDKMPKRSFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVVLR--TTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLEL-NSKKKINHGIAICHMDTSSW 592
BLAST of CX288415 vs. ExPASy Swiss-Prot
Match: JP630_ARATH (Probable polygalacturonase non-catalytic subunit JP630 OS=Arabidopsis thaliana GN=JP630 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15 Identity = 60/189 (31.75%), Postives = 85/189 (44.97%), Query Frame = 1 Query: 154 FFTLRDLKVGNKMALYLP-IEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEI---PASKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVG--DNGDIADAISACHLDTSQW 702 FF LK G +++P I+D FLPR PFS ++ I + S + D +R CE P E K C S E M+DFA S+ G + TT+S + + + I +V I +K V+CH YPY +Y CHS +V+ L+ I I+ CH+DTS W Sbjct: 407 FFRESMLKEGT--LIWMPDIKDKMPKRSFLPRSIVSKLPFSTSKIAEIKRVFHANDNSTMEGIITDAVRECERPPTVSETKRCVGSAEDMIDFATSVLGRSVVLR--TTESVAGSKEKVMIGKVNGINGGRVTKSVSCHQSLYPYLLYYCHSVPKV---RVYESDLLDPKSKAKINHGIAICHMDTSAW 588
BLAST of CX288415 vs. ExPASy Swiss-Prot
Match: BURP4_ORYSJ (BURP domain-containing protein 4 OS=Oryza sativa subsp. japonica GN=BURP4 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14 Identity = 61/192 (31.77%), Postives = 92/192 (47.92%), Query Frame = 1 Query: 172 LKVGNKMALYLPIEDHSNSA---HFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPI-----KDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILE--VQEIPASKMVACHYMSYPYAIYGCHS-----HMTENINKVFRVSLVGDNGDIADAISACHLDTSQW 702 L G K+AL P DH +A F+ +++ D+ PF L+ + IL + I S +A + DTLR C ++ CATS E++LDFA S G+ + VTT + Y + V I +VACH M Y Y +Y CH + +++ V V L G A A++ CH++T+ W Sbjct: 266 LPEGTKLAL--PHGDHGVAAAAPRFIYKDKGDAVPFDLRAMDAILAMFGILPGSDKAAQVADTLRACSELTAAGGGGEEPRACCATSREAVLDFAASALGTSAP-RAVTTLVHGREPRRYVVAADGVARIGGDAVVACHPMPYLYEVYYCHRPADAVALRVDLHAVADVGLGG-----ATAVAVCHVNTTTW 449 The following BLAST results are available for this feature:
BLAST of CX288415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288415 ID=CX288415; Name=CX288415; organism=Citrus clementina; type=EST; length=703bpback to top |