CX288415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288415 vs. ExPASy Swiss-Prot
Match: BURP9_ORYSJ (BURP domain-containing protein 9 OS=Oryza sativa subsp. japonica GN=BURP9 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 56/166 (33.73%), Postives = 88/166 (53.01%), Query Frame = 1 Query: 226 SAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCE-TDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQN--YTILEVQEIPASK-MVACHYMSYPYAIYGCHSHMTENINKVFRVSLV-GDNGD--IADAISACHLDTSQW 702 S+ FL R + PFS+K + IL + S P + A + TL+ CE T + E CATS+ES+LD S G++ + +T + + Y + +P S+ M+ACH M YPY ++ CH T ++++VSLV G++G I ++ CH +TS W Sbjct: 314 SSIFLHRNNSKHIPFSMKNITDILTMFS-PVSATMADGIAATLQACEHTGMVHGEKAKCATSIESLLDVVVSSLGTKL-VRALTPGAPMEGVPSLRYIVASATPVPNSQSMLACHDMLYPYKVFFCH---TPKQTRLYQVSLVSGESGRPLIDGLLAVCHQNTSDW 474
BLAST of CX288415 vs. ExPASy Swiss-Prot
Match: BURPA_ORYSJ (BURP domain-containing protein 10 OS=Oryza sativa subsp. japonica GN=BURP10 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 59/191 (30.89%), Postives = 92/191 (48.17%), Query Frame = 1 Query: 172 LKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETD-PIKDEIKTCATSLESMLDFAGSIFGSE--TGFKTVTTKSTSNTFQNYTILEVQEIPASK--MVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNG---------DIADAISACHLDTSQW 702 LK G+ + Y I + A FL R+ ADS P S K IL + S P A ++ L CE PIK E + CATS+ES+++FA S+ G+ F Y ++ V+ + + V CH M +P+A++ CH+ N +V+ V L + + +A++ CHLDTS++ Sbjct: 118 LKPGSIITPY--ITGIATRAPFLRRDIADSIPVSTKNFADILAMFS-PISLVMADGIQSALDTCEHHRPIKGEERACATSIESVVEFAMSVLGTRDLRAFSPDVPPEGIMPGNMYKVVAVRTVAGLRGDTVTCHTMRFPFAVFYCHA---INPTRVYAVVLESEEDGSGSGSGTPEKMEALAVCHLDTSRF 302
BLAST of CX288415 vs. ExPASy Swiss-Prot
Match: Y639_ARATH (Probable polygalacturonase non-catalytic subunit At1g60390 OS=Arabidopsis thaliana GN=At1g60390 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12 Identity = 56/188 (29.79%), Postives = 80/188 (42.55%), Query Frame = 1 Query: 154 FFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEI---PASKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNG--DIADAISACHLDTSQW 702 FF LK G M + I+D FLPR + PFS + I + S A + + CE E K C S E M+DFA S+ G G TT++ + + I +V I ++ V+CH YPY +Y CHS +V+ L+ I ++ CH+DTS W Sbjct: 409 FFREAMLKEGTLMQMP-DIKDKMPKRTFLPRNIVKNLPFSSSTIGEIWRVFGAGENSSMAGIISSAVSECERPASHGETKRCVGSAEDMIDFATSVLG--RGVVVRTTENVVGSKKKVVIGKVNGINGGDVTRAVSCHQSLYPYLLYYCHSVPRV---RVYETDLLDPKSLEKINHGVAICHIDTSAW 590
BLAST of CX288415 vs. ExPASy Swiss-Prot
Match: BURPB_ORYSJ (BURP domain-containing protein 11 OS=Oryza sativa subsp. japonica GN=BURP11 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12 Identity = 60/216 (27.78%), Postives = 95/216 (43.98%), Query Frame = 1 Query: 151 IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDP---IKDEIKTCATSLESMLDFAGSIFGSET--GFKTVTTKSTSNTFQ----NYTILEVQEIPA--------------SKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGD---------IADAISACHLDTSQW 702 +FF L+ G+ + +P ++ FLPR AD+ PFS + +L + + P A+ + L C + E CATSLES+ D A S+ G+ F + + T Y + V+E+ A + +VACH ++YPYA++ CHS V V+ +GD +A++ CHLDTS+W Sbjct: 73 VFFFRDALRPGSVITPTIP--PTTSLPAFLPRHVADAIPFSADRFADVLAMFA-PASLAMAREIRWALDTCGQRAAALLPGEKAGCATSLESLADLAASLLGTRDVRAFSAADLPTDAATTPARRGRYNVTSVRELSAMAGSGSSSSSEPAPAAVVACHDLTYPYAVFYCHSTKPTAAYAVTLVAATTGDGDGEGEAASPAKMEALAVCHLDTSRW 285 The following BLAST results are available for this feature:
BLAST of CX288415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288415 ID=CX288415; Name=CX288415; organism=Citrus clementina; type=EST; length=703bpback to top |