CX288432

Overview
NameCX288432
Unique NameCX288432
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length773
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS8_HORVU (Nicotianamine synthase 8 OS=Hordeum vulgare GN=NAS8 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.413e-49
Identity = 98/187 (52.41%), Postives = 132/187 (70.59%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCS--RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDL--LGFEVLSVFHPTDEVINSVVLARK 549
            P+ +L +FPYYSNYI LS+LE+ +L ++      P ++AFIGSGPLP +S VLA  HL    FDNYD+  +AN +A  L  +D D+  RM FHT D+ +++  L  Y+VVFLAALVGM  ++K +VI HL  +MA GA L++RSAHG   FLYP+VDP D+   GFEVL+V HP D+V+NSV++A K
Sbjct:   92 PLDHLGMFPYYSNYINLSKLEYELLARYVPGRHRPARVAFIGSGPLPFSSYVLAARHLPDAMFDNYDLCSAANDRASKLFRADKDVGARMSFHTADVADLTGELAAYDVVFLAALVGMAAEDKTKVIAHLGAHMADGAALVVRSAHGHVGFLYPIVDPQDIGRGGFEVLAVCHPDDDVVNSVIIAHK 278          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS4_HORVU (Probable nicotianamine synthase 4 OS=Hordeum vulgare GN=NAS4 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.152e-49
Identity = 99/187 (52.94%), Postives = 133/187 (71.12%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCS--RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDL--LGFEVLSVFHPTDEVINSVVLARK 549
            P+ +L +FPYYSNYI LS+LE+ +L ++      P ++AFIGSGPLP +S VLA  HL  T FDNYD+  +AN +A  L  +D D+  RM FHT D+ +++  L  Y+VVFLAALVGM  ++K +VI HL  +MA GA L+ R  HGAR FLYP+VDP D+   GFEVL+V HP D+V+NSV++A+K
Sbjct:   92 PLDHLGVFPYYSNYINLSKLEYELLARYVPGRHRPARVAFIGSGPLPFSSYVLAARHLPDTVFDNYDLCGAANDRATRLFRADKDVGARMSFHTADVADLTDELATYDVVFLAALVGMAAEDKAKVIAHLGAHMADGAALVAR--HGARGFLYPIVDPQDIGRGGFEVLAVCHPDDDVVNSVIIAQK 276          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS1_ORYSJ (Nicotianamine synthase 1 OS=Oryza sativa subsp. japonica GN=NAS1 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.116e-49
Identity = 109/224 (48.66%), Postives = 148/224 (66.07%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSRF-PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLV-SSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDLL--GFEVLSVFHPTDEVINSVVLARKY---VMPSLEQQDQLSPK---IL-----PKKCSKIEA 627
            P+ +L  FPYY NY+ LS+LE+++L ++     PT++AF+GSGPLP +S+VLA +HL    FDNYD   +AN +A  L   +D  L  RM FHT D+  ++  L  Y+VVFLAALVGM  +EK  VI HL  +MA GA L++RSAHGAR FLYP+VDP D+   GF+VL+V HP DEVINSV++ARK       +  ++D+L+     +L     P  C K+EA
Sbjct:   92 PLDHLARFPYYGNYVNLSKLEYDLLVRYVPGIAPTRVAFVGSGPLPFSSLVLAAHHLPDAVFDNYDRCGAANERARRLFRGADEGLGARMAFHTADVATLTGELGAYDVVFLAALVGMAAEEKAGVIAHLGAHMADGAALVVRSAHGARGFLYPIVDPEDVRRGGFDVLAVCHPEDEVINSVIVARKVGAAAAAAAARRDELADSRGVVLPVVGPPSTCCKVEA 315          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS1_ORYSI (Nicotianamine synthase 1 OS=Oryza sativa subsp. indica GN=NAS1 PE=2 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 4.116e-49
Identity = 109/224 (48.66%), Postives = 148/224 (66.07%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSRF-PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLV-SSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDLL--GFEVLSVFHPTDEVINSVVLARKY---VMPSLEQQDQLSPK---IL-----PKKCSKIEA 627
            P+ +L  FPYY NY+ LS+LE+++L ++     PT++AF+GSGPLP +S+VLA +HL    FDNYD   +AN +A  L   +D  L  RM FHT D+  ++  L  Y+VVFLAALVGM  +EK  VI HL  +MA GA L++RSAHGAR FLYP+VDP D+   GF+VL+V HP DEVINSV++ARK       +  ++D+L+     +L     P  C K+EA
Sbjct:   92 PLDHLARFPYYGNYVNLSKLEYDLLVRYVPGIAPTRVAFVGSGPLPFSSLVLAAHHLPDAVFDNYDRCGAANERARRLFRGADEGLGARMAFHTADVATLTGELGAYDVVFLAALVGMAAEEKAGVIAHLGAHMADGAALVVRSAHGARGFLYPIVDPEDVRRGGFDVLAVCHPEDEVINSVIVARKVGAAAAAAAARRDELADSRGVVLPVVGPPSTCCKVEA 315          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS2_ORYSJ (Nicotianamine synthase 2 OS=Oryza sativa subsp. japonica GN=NAS2 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.484e-48
Identity = 100/187 (53.48%), Postives = 133/187 (71.12%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSRF-PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLV-SSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDLL--GFEVLSVFHPTDEVINSVVLARK 549
            P+ +L  FPYY NY+ LS+LE+++L ++     PT++AF+GSGPLP +S+VLA +HL    FDNYD   +AN +A  L   +D  L  RM FHT D+  ++  L  Y+VVFLAALVGM  +EK  VI HL  +MA GA L++RSAHGAR FLYP+VD  D+   GF+VL+V+HP DEVINSV++ARK
Sbjct:   92 PLDHLARFPYYGNYVNLSKLEYDLLVRYVPGIAPTRVAFVGSGPLPFSSLVLAAHHLPDAVFDNYDRCGAANERARRLFRGADEGLGARMAFHTADVATLTGELGAYDVVFLAALVGMAAEEKAGVIAHLGAHMADGAALVVRSAHGARGFLYPIVDLEDIRRGGFDVLAVYHPDDEVINSVIVARK 278          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS1_HORVU (Nicotianamine synthase 1 OS=Hordeum vulgare GN=NAS1 PE=1 SV=3)

HSP 1 Score: 188.348 bits (477), Expect = 3.853e-47
Identity = 100/193 (51.81%), Postives = 134/193 (69.43%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSRF-PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPD-LSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDLL--GFEVLSVFHPTDEVINSVVLARKYVMPSL 567
            P+ +L +FPYYSNY+ LS+LE+ +L +H     P ++AF+GSGPLP +S+VLA +HL  T FDNYD+  +AN +A  L  +  D +  RM FHT D+ +++  L  Y+VVFLAALVGM  +EK +VI HL  +M  GA L++RSA   R FLYP+VDP D+   GFEVL+V HP  EVINSV++ARK V   L
Sbjct:   92 PLDHLGLFPYYSNYVNLSRLEYELLARHVPGIAPARVAFVGSGPLPFSSLVLAAHHLPETQFDNYDLCGAANERARKLFGATADGVGARMSFHTADVADLTQELGAYDVVFLAALVGMAAEEKAKVIAHLGAHMVEGASLVVRSAR-PRGFLYPIVDPEDIRRGGFEVLAVHHPEGEVINSVIVARKAVEAQL 283          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS7_HORVU (Probable nicotianamine synthase 7 OS=Hordeum vulgare GN=NAS7 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.121e-46
Identity = 98/187 (52.41%), Postives = 131/187 (70.05%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSR--FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDL--LGFEVLSVFHPTDEVINSVVLARK 549
            P+ +L +FPYYSNYI LS+LE+ +L ++      P ++AFIGSGPLP +S VLA  HL  T FDNY    +AN +A  L  +D D+  RM FHT D+ +++  L  Y+VVFLAALVGM  ++K +   HL  +MA GA L +RSAHGAR FLYP+VDP D+   GFEVL+V HP D+V+NSV++A+K
Sbjct:   92 PLDHLGVFPYYSNYINLSKLEYELLARYVPGGIAPARVAFIGSGPLPFSSYVLAARHLPDTVFDNYVPVRAANDRATRLFRADKDVGARMSFHTADVADLTDELATYDVVFLAALVGMAAEDKGQGDPHLGAHMADGAAL-VRSAHGARGFLYPIVDPQDIGRGGFEVLAVCHPDDDVVNSVIIAQK 277          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS6_HORVU (Probable nicotianamine synthase 6 OS=Hordeum vulgare GN=NAS6 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.464e-46
Identity = 97/187 (51.87%), Postives = 131/187 (70.05%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSRFPTK--IAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDL--LGFEVLSVFHPTDEVINSVVLARK 549
            P+ +L +FPYYSNYI LS+LE+ +L ++      +  +AFIGSGPLP +S VLA  HL    FDNYD+  +AN +A  L  +D D+  RM FHT D+ +++  L  Y+VVFLAALVGM  ++K +VI HL  +MA GA L++RSA  AR FLYP+VDP D+   GFEVL+V HP D+V+NSV++A K
Sbjct:   92 PLDHLGMFPYYSNYINLSKLEYELLARYVPGGIARPAVAFIGSGPLPFSSYVLAARHLPDAMFDNYDLCSAANDRASKLFRADKDVGARMSFHTADVADLTRELAAYDVVFLAALVGMAAEDKAKVIPHLGAHMADGAALVVRSAQ-ARGFLYPIVDPQDIGRGGFEVLAVCHPDDDVVNSVIIAHK 277          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS2_ORYSI (Nicotianamine synthase 2 OS=Oryza sativa subsp. indica GN=NAS2 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.464e-46
Identity = 97/187 (51.87%), Postives = 131/187 (70.05%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSRF-PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLV-SSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDLL--GFEVLSVFHPTDEVINSVVLARK 549
            P+ +L  FPYY NY+ LS+LE+++L ++     PT++AF+GSGPLP +S+VLA +HL    FDNYD   +AN +A  L   +D  L  RM FHT D+  ++  L  Y+VVFLAALVGM  +EK  VI HL  +MA GA L++ + HGAR FLYP+VD  D+   GF+VL+V+HP DEVINSV++ARK
Sbjct:   92 PLDHLARFPYYGNYVNLSKLEYDLLVRYVPGIAPTRVAFVGSGPLPFSSLVLAAHHLPDAVFDNYDRCGAANERARRLFRGADEGLGARMAFHTADVATLTGELGAYDVVFLAALVGMAAEEKAGVIAHLGAHMADGAALVVSARHGARGFLYPIVDLEDIRRGGFDVLAVYHPDDEVINSVIVARK 278          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS5_HORVU (Nicotianamine synthase-like 5 protein OS=Hordeum vulgare GN=NAS5 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.979e-43
Identity = 96/190 (50.53%), Postives = 131/190 (68.95%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLV-SSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDL--LGFEVLSVFHPT-DEVINSVVLARKYVM 558
            P+ +L  FPY+ NY+ LS+LE ++L  H +  P ++AFIGSGPLP +S+ LA  HL  T FDNYD    AN +A+ LV ++D  + +RM FHT ++ ++++ L  Y+VVFLAALVGM   EK   I HL K+MA GA+L+  + HGARAFLYPVV+  D+   GF+VL+V HP  DEV NS ++ARK  M
Sbjct:   92 PLDHLGRFPYFDNYVNLSKLEHDLLAGHVAA-PARVAFIGSGPLPFSSLFLATYHLPDTRFDNYDRCSVANGRAMKLVGAADEGVRSRMAFHTAEVTDLTAELGAYDVVFLAALVGMTSKEKADAIAHLGKHMADGAVLVREALHGARAFLYPVVELDDVGRGGFQVLAVHHPAGDEVFNSFIVARKVKM 280          
The following BLAST results are available for this feature:
BLAST of CX288432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
NAS8_HORVU2.413e-4952.41Nicotianamine synthase 8 OS=Hordeum vulgare GN=NAS... [more]
NAS4_HORVU3.152e-4952.94Probable nicotianamine synthase 4 OS=Hordeum vulga... [more]
NAS1_ORYSJ4.116e-4948.66Nicotianamine synthase 1 OS=Oryza sativa subsp. ja... [more]
NAS1_ORYSI4.116e-4948.66Nicotianamine synthase 1 OS=Oryza sativa subsp. in... [more]
NAS2_ORYSJ3.484e-4853.48Nicotianamine synthase 2 OS=Oryza sativa subsp. ja... [more]
NAS1_HORVU3.853e-4751.81Nicotianamine synthase 1 OS=Hordeum vulgare GN=NAS... [more]
NAS7_HORVU1.121e-4652.41Probable nicotianamine synthase 7 OS=Hordeum vulga... [more]
NAS6_HORVU1.464e-4651.87Probable nicotianamine synthase 6 OS=Hordeum vulga... [more]
NAS2_ORYSI1.464e-4651.87Nicotianamine synthase 2 OS=Oryza sativa subsp. in... [more]
NAS5_HORVU1.979e-4350.53Nicotianamine synthase-like 5 protein OS=Hordeum v... [more]

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Properties
Property NameValue
Genbank descriptionC01020D05SK Veg1 Citrus clementina cDNA clone C01020D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288432 ID=CX288432; Name=CX288432; organism=Citrus clementina; type=EST; length=773bp
CCTATTGCCAATCTCAATATTTTCCCTTACTATTCAAACTACATCAAGCT
TAGCCAACTTGAGTTCAACATCCTTACCCAACATTGCTCTCGCTTCCCTA
CCAAAATTGCATTTATTGGGTCCGGCCCTCTTCCTTTGACTTCAATTGTT
TTAGCCATTAATCATCTCACTACTACTTGTTTCGACAACTATGATATTGA
CCCTTCGGCCAATTCCAAGGCTCTTAGCTTGGTTTCATCTGACCCTGATT
TGTCAACACGAATGTTCTTTCACACTACTGATATAATGAATGTTTCATCA
GCGCTTAAAGACTATGAAGTCGTTTTCTTGGCAGCGCTGGTAGGGATGGA
CAAGGATGAAAAGATTCGAGTCATCGATCATTTGGCTAAGTACATGGCTC
CCGGTGCTCTTCTAATGCTGAGGAGTGCTCATGGAGCTCGTGCCTTCCTT
TATCCGGTTGTTGATCCTTGTGATCTTCTCGGGTTCGAGGTTTTATCTGT
CTTTCATCCTACTGATGAAGTGATCAATTCAGTGGTACTTGCGCGTAAGT
ACGTAATGCCATCACTCGAGCAACAAGATCAGCTTAGCCCTAAAATTCTG
CCTAAGAAATGTTCCAAGATTGAAGCCTTCAATCCCCTTCACCATGGAAG
CATGATTGATGAATTGGCCATTGAGGAGCAGCTCTCATGAATTTCTTCGC
GTTCCGATCATGAATTGGATCCCTATATGCTCTTCTGGCGTGTGATCACG
TATGTCTACATCTTATATACATC
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