CX288475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288475 vs. ExPASy Swiss-Prot
Match: LIPB_SYNPW (Octanoyltransferase OS=Synechococcus sp. (strain WH7803) GN=lipB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22 Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = 3 Query: 411 LVPYNEAWSWQKNIVKEK--KALIERNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIINLRNHKMDLHW 701 LVP+ +AW+WQ+ + +E+ K + P+ + +LQH P YT+G G SE++L FD + PP ++R +RGGEVT+H PGQLV+YP+++L H+ DLHW Sbjct: 28 LVPFVQAWTWQR-LWQERLLKGADSGGDPPPEAVWLLQHPPCYTLGRGASEDHLLFDPEHPPAPLHRIDRGGEVTHHAPGQLVIYPVLDLHRHRTDLHW 125
BLAST of CX288475 vs. ExPASy Swiss-Prot
Match: LIPB_TRIEI (Octanoyltransferase OS=Trichodesmium erythraeum (strain IMS101) GN=lipB PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.814e-21 Identity = 46/100 (46.00%), Postives = 68/100 (68.00%), Query Frame = 3 Query: 411 LVPYNEAWSWQKNIVKEKKALIERNEDCP---DTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIINLRNHKMDLHW 701 L Y+ AW WQ+++V+++ +CP D LI+L+H VYT+G G ++L FD ++++R ERGGEVTYH PGQLV YPI+NL++++ DLHW Sbjct: 13 LTKYSVAWEWQRSLVQQR-------HNCPELADVLILLEHPQVYTLGQGAKLDFLKFDPTQNKYELHRVERGGEVTYHCPGQLVGYPILNLKHYQQDLHW 105
BLAST of CX288475 vs. ExPASy Swiss-Prot
Match: LIPB_PROMM (Octanoyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=lipB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.954e-20 Identity = 48/113 (42.48%), Postives = 68/113 (60.18%), Query Frame = 3 Query: 363 QLNYWFRCECFDLYKELVPYNEAWSWQKNIVKEKKALIERNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIINLRNHKMDLHW 701 Q + F C E VP+ AW WQ+ ++ A N P + +LQH YT+G G SE L FD+ +PP ++R +RGGEVT+H PGQLV+YP+++LR ++ DLHW Sbjct: 18 QSTFLFECS------EPVPFEMAWLWQQQWQQQLFA----NPLAPQAVWLLQHQACYTLGRGASEANLLFDVNNPPAALHRIDRGGEVTHHLPGQLVVYPVLDLRRYQTDLHW 120
BLAST of CX288475 vs. ExPASy Swiss-Prot
Match: LIPB_PROM4 (Octanoyltransferase OS=Prochlorococcus marinus (strain MIT 9211) GN=lipB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.101e-18 Identity = 42/98 (42.86%), Postives = 65/98 (66.33%), Query Frame = 3 Query: 408 ELVPYNEAWSWQKNIVKEKKALIERNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIINLRNHKMDLHW 701 EL+ + AW WQK +++ L+ + +L+HS YT+G G +E+ L F+L + P+ VYR +RGGEVT+H PGQLV+Y +++LR +K DL+W Sbjct: 37 ELIDFRVAWDWQK----QRQKLLFEKPGSSQAVWLLEHSECYTLGRGATEDNLLFNLSNSPWDVYRIDRGGEVTHHMPGQLVVYLVLDLRRYKTDLNW 130
BLAST of CX288475 vs. ExPASy Swiss-Prot
Match: LIPB_SYNPX (Octanoyltransferase OS=Synechococcus sp. (strain WH8102) GN=lipB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = 3 Query: 408 ELVPYNEAWS----WQKNIVKEKKALIERNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIINLRNHKMDLHW 701 + VP+ +W+ WQ+ ++++ P+ + +LQH YT+G G S E+L+F L PP V+R +RGGEVT+H PGQLV YP+++LR + DLHW Sbjct: 27 DAVPFERSWADQRHWQQRLLEQPHL--------PEAVWLLQHKACYTLGRGASSEHLHFPLDQPPAPVHRIDRGGEVTHHLPGQLVAYPVLDLRRRQPDLHW 120
BLAST of CX288475 vs. ExPASy Swiss-Prot
Match: LIPB_SYNSC (Octanoyltransferase OS=Synechococcus sp. (strain CC9605) GN=lipB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.202e-18 Identity = 43/100 (43.00%), Postives = 63/100 (63.00%), Query Frame = 3 Query: 414 VPYNEAWS----WQKNIVKEKKALIERNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIINLRNHKMDLHW 701 V ++ AWS WQ ++ + A P+ + +LQH YT+G G SE++L+FD +PP +YR +RGGEVT+H PGQLV YP+++L+ DLHW Sbjct: 29 VRFDAAWSAQQRWQTRLLADPSA--------PEAVWILQHQTCYTLGRGASEKHLHFDPAEPPAPLYRIDRGGEVTHHLPGQLVAYPVLDLQRRTPDLHW 120
BLAST of CX288475 vs. ExPASy Swiss-Prot
Match: LIPB_SYNS9 (Octanoyltransferase OS=Synechococcus sp. (strain CC9902) GN=lipB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18 Identity = 41/100 (41.00%), Postives = 63/100 (63.00%), Query Frame = 3 Query: 411 LVPYNEAWS----WQKNIVKEKKALIERNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIINLRNHKMDLH 698 L+P+ AW WQ+ + +E + P+ + +LQH YT+G G S ++L+FD +PP ++R +RGGEVT+H PGQLV YP+++L+ H DLH Sbjct: 26 LIPFERAWRDQQLWQQRLFEEPSS--------PEAVWILQHPACYTLGRGASAQHLHFDPNEPPAPLHRIDRGGEVTHHLPGQLVAYPVLDLQRHTPDLH 117
BLAST of CX288475 vs. ExPASy Swiss-Prot
Match: LIPB_PROMA (Octanoyltransferase OS=Prochlorococcus marinus GN=lipB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17 Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 3 Query: 408 ELVPYNEAWSWQKNIVKEKKALIERNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIINLRNHKMDLHW 701 EL+ + AW WQ+ ++K L E + + +L+H YT+G G SE+ L FD++ PP YR +RGG+VT+H PGQLV+Y +++LR +K DL W Sbjct: 23 ELIDFKIAWDWQRKW--QEKLLAEPSNK--QAVWMLEHFDCYTLGRGASEDNLLFDVEKPPIDFYRIDRGGDVTHHLPGQLVVYLVLDLRRYKTDLDW 116
BLAST of CX288475 vs. ExPASy Swiss-Prot
Match: LIPB_PROHO (Octanoyltransferase (Fragment) OS=Prochlorothrix hollandica GN=lipB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15 Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 477 ERNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLK------------------DPPFQVYRTERGGEVTYHGPGQLVMYPIINLRNHKMDLHW 701 +R+ D DTL++L+H PVYT+G G S +++ F P +++RTERGGEVTYH PGQLV YPI+NLR DLHW Sbjct: 5 QRDPDLADTLLLLEHPPVYTLGRGSSLDFIKFTPPASFTAGVTPSSRAEPTPPQPGPELHRTERGGEVTYHCPGQLVGYPILNLRRLSADLHW 97
BLAST of CX288475 vs. ExPASy Swiss-Prot
Match: LIPB_PROMT (Octanoyltransferase OS=Prochlorococcus marinus (strain NATL2A) GN=lipB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15 Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 405 KELVPYNEAWSWQKNIVKEKKALIERNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIINLRNHKMDLHW 701 K +VP+ A WQKN +K LIE+ P + +L+H +TMG G ++ L F+ + P V+ ERGGEVT+H PGQ+V Y ++NL HK DL W Sbjct: 36 KNIVPFETALGWQKNF---QKNLIEQPFS-PQAVWLLEHFSCFTMGRGSDKKNLLFEENNSPLPVFSIERGGEVTHHMPGQIVGYLVLNLSLHKKDLSW 130 The following BLAST results are available for this feature:
BLAST of CX288475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288475 ID=CX288475; Name=CX288475; organism=Citrus clementina; type=EST; length=703bpback to top |