CX288477
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A4_VOLCA (Histone H2A-IV OS=Volvox carteri PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24 Identity = 55/66 (83.33%), Postives = 59/66 (89.39%), Query Frame = -3 Query: 395 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGD 592 +VLELAGNAARDNKKNRIVPRHIQLA+RNDEEL KLLG VTIA+GGVLPNIH LLPKK GKG+ Sbjct: 61 EVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGDVTIASGGVLPNIHAVLLPKKSKGGKGE 126
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A3_VOLCA (Histone H2A-III OS=Volvox carteri PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24 Identity = 55/66 (83.33%), Postives = 59/66 (89.39%), Query Frame = -3 Query: 395 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGD 592 +VLELAGNAARDNKKNRIVPRHIQLA+RNDEEL KLLG VTIA+GGVLPNIH LLPKK GKG+ Sbjct: 61 EVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGDVTIASGGVLPNIHAVLLPKKSKGGKGE 126
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A1_DEBHA (Histone H2A.1 OS=Debaryomyces hansenii GN=HTA1 PE=3 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 3.015e-24 Identity = 56/73 (76.71%), Postives = 63/73 (86.30%), Query Frame = -3 Query: 374 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 592 ++LELAGNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK KGK ASQE Sbjct: 62 EILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKSAKGK-----ASQE 129
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A1_CANAL (Histone H2A.1 OS=Candida albicans GN=HTA1 PE=3 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 3.015e-24 Identity = 52/63 (82.54%), Postives = 59/63 (93.65%), Query Frame = -3 Query: 404 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKG 592 ++LELAGNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GKG Sbjct: 62 EILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQNLLPKKSGKG 124
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A_MAGGR (Histone H2A OS=Magnaporthe grisea GN=HTA1 PE=2 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 3.938e-24 Identity = 56/73 (76.71%), Postives = 63/73 (86.30%), Query Frame = -3 Query: 374 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 592 ++LELAGNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GK G +ASQE Sbjct: 64 EILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGKTAGG-KNASQE 135
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A3_ARATH (Probable histone H2A.3 OS=Arabidopsis thaliana GN=At4g27230 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.938e-24 Identity = 55/64 (85.94%), Postives = 57/64 (89.06%), Query Frame = -3 Query: 401 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 592 +VLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK 126
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A6_ARATH (Histone H2A.6 OS=Arabidopsis thaliana GN=RAT5 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24 Identity = 55/64 (85.94%), Postives = 57/64 (89.06%), Query Frame = -3 Query: 401 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 592 +VLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGASK 126
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A2_ARATH (Probable histone H2A.2 OS=Arabidopsis thaliana GN=At3g20670 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24 Identity = 55/64 (85.94%), Postives = 57/64 (89.06%), Query Frame = -3 Query: 401 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 592 +VLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGASK 126
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A1_ARATH (Probable histone H2A.1 OS=Arabidopsis thaliana GN=At1g51060 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24 Identity = 55/64 (85.94%), Postives = 57/64 (89.06%), Query Frame = -3 Query: 401 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 592 +VLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGASK 126
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A1_PICST (Histone H2A.1 OS=Pichia stipitis GN=HTA2 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.773e-24 Identity = 55/73 (75.34%), Postives = 62/73 (84.93%), Query Frame = -3 Query: 374 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 592 ++LELAGNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GK ASQE Sbjct: 62 EILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKSGKS----AKASQE 130 The following BLAST results are available for this feature:
BLAST of CX288477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288477 ID=CX288477; Name=CX288477; organism=Citrus clementina; type=EST; length=705bpback to top |