CX288477
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AV_DROME (Histone H2A.v OS=Drosophila melanogaster GN=His2Av PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = -3 Query: 416 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 592 +VLELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ KK Sbjct: 65 EVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AV_DANRE (Histone H2A.V OS=Danio rerio GN=h2afv PE=2 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = -3 Query: 416 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 592 +VLELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ KK Sbjct: 65 EVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AV_CHICK (Histone H2A.V OS=Gallus gallus GN=H2AFV PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = -3 Query: 416 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 592 +VLELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ KK Sbjct: 65 EVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AV_BOVIN (Histone H2A.V OS=Bos taurus GN=H2AFV PE=2 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = -3 Query: 416 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 592 +VLELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ KK Sbjct: 65 EVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AZL_XENTR (Histone H2A.Z-like OS=Xenopus tropicalis GN=h2a.zl PE=2 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = -3 Query: 416 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 592 +VLELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ KK Sbjct: 65 EVLELAGNASKDLKVKRISPRHLQLAIRGDEELDALI-KATIAGGGVIPHIHKSLIGKK 122
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AZL_XENLA (Histone H2A.Z-like OS=Xenopus laevis GN=h2a.zl1 PE=2 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = -3 Query: 416 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 592 +VLELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ KK Sbjct: 65 EVLELAGNASKDLKVKRISPRHLQLAIRGDEELDALI-KATIAGGGVIPHIHKSLIGKK 122
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AZ_PHANO (Histone H2A.Z OS=Phaeosphaeria nodorum GN=HTZ1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12 Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = -3 Query: 398 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKG 592 +VLELAGNAA+D K RI PRH+QLA+R DEEL L+ TIA GGVLP+I++ LL K K KG Sbjct: 71 EVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLI-RATIAFGGVLPHINRALLLKVEQKKKG 134
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AV_RABIT (Histone H2A.V OS=Oryctolagus cuniculus GN=H2AFV PE=2 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12 Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = -3 Query: 416 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 592 +VLELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GG +P+IH++L+ KK Sbjct: 65 EVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGAIPHIHKSLIGKK 122
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AV_CAEEL (Histone H2A.V OS=Caenorhabditis elegans GN=htz-1 PE=2 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12 Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = -3 Query: 377 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQ 592 +VLELAGNA++D K RI PRH+ LA+R DEEL L+ TIA GGV+P+IH+ L+ KK G G+ Q Sbjct: 67 EVLELAGNASKDLKVKRITPRHLHLAIRGDEELDTLI-KATIAGGGVIPHIHRYLMNKKGAPVPGKPGAPGQ 137
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AZ_YEAST (Histone H2A.Z OS=Saccharomyces cerevisiae GN=HTZ1 PE=1 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12 Identity = 38/63 (60.32%), Postives = 48/63 (76.19%), Query Frame = -3 Query: 404 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKG 592 +VLELAGNAA+D K RI PRH+QLA+R D+EL L+ TIA+GGVLP+I++ LL K KG Sbjct: 70 EVLELAGNAAKDLKVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLKVEKKG 131 The following BLAST results are available for this feature:
BLAST of CX288477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288477 ID=CX288477; Name=CX288477; organism=Citrus clementina; type=EST; length=705bpback to top |