CX288477
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AV1_ARATH (Histone H2A variant 1 OS=Arabidopsis thaliana GN=H2AV PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = -3 Query: 419 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 592 +VLELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K Sbjct: 76 EVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 132
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AZ_YARLI (Histone H2A.Z OS=Yarrowia lipolytica GN=HTZ1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = -3 Query: 419 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 592 +VLELAGNAARD K RI PRH+QLA+R DEEL L+ TIA GGV+P+I++ LL K Sbjct: 77 EVLELAGNAARDLKVKRITPRHLQLAIRGDEELDTLI-QATIAYGGVMPHINKALLLK 133
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AZ_PICST (Histone H2A.Z OS=Pichia stipitis GN=HTZ1 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = -3 Query: 419 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 592 +VLELAGNAA+D K RI PRH+QLA+R DEEL L+ TIA GGVLP+I++ LL K Sbjct: 69 EVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLI-KATIAYGGVLPHINKALLLK 125
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AZ_PICGU (Histone H2A.Z OS=Pichia guilliermondii GN=HTZ1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = -3 Query: 419 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 592 +VLELAGNAA+D K RI PRH+QLA+R DEEL L+ TIA GGVLP+I++ LL K Sbjct: 69 EVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLI-KATIAYGGVLPHINKALLLK 125
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AZ_LODEL (Histone H2A.Z OS=Lodderomyces elongisporus GN=HTZ1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = -3 Query: 419 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 592 +VLELAGNAA+D K RI PRH+QLA+R DEEL L+ TIA GGVLP+I++ LL K Sbjct: 69 EVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLI-KATIAYGGVLPHINKALLLK 125
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AZ_GIBZE (Histone H2A.Z OS=Gibberella zeae GN=HTZ1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = -3 Query: 401 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 592 +VLELAGNAA+D K RI PRH+QLA+R DEEL L+ TIA GGVLP+I++ LL K K K Sbjct: 76 EVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLI-RATIAYGGVLPHINRALLLKVEQKKK 138
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AV_TETTH (Histone H2A.Z OS=Tetrahymena thermophila GN=HTA3 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = -3 Query: 383 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSA 592 +VLELAGNA++D K RI PRH+ LA+R DEEL L+ TIA GGV+P+IH+ LL K K + +A Sbjct: 75 EVLELAGNASKDFKVRRITPRHLLLAIRGDEELDILI-KATIAGGGVIPHIHKALLGKHSTKNRSSAKTA 143
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AV2_ARATH (Probable histone H2A variant 2 OS=Arabidopsis thaliana GN=At2g38810 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = -3 Query: 419 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 592 +VLELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K Sbjct: 76 EVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNK 132
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AZ_NEUCR (Histone H2A.Z OS=Neurospora crassa GN=htz-1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = -3 Query: 401 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 592 +VLELAGNAA+D K RI PRH+QLA+R DEEL L+ TIA GGVLP+I++ LL K K K Sbjct: 75 EVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLI-RATIAFGGVLPHINRALLLKVEQKKK 137
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2AZ_MAGGR (Histone H2A.Z OS=Magnaporthe grisea GN=HTZ1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = -3 Query: 401 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 592 +VLELAGNAA+D K RI PRH+QLA+R DEEL L+ TIA GGVLP+I++ LL K K K Sbjct: 74 EVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLI-RATIAFGGVLPHINRALLLKVEQKKK 136 The following BLAST results are available for this feature:
BLAST of CX288477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288477 ID=CX288477; Name=CX288477; organism=Citrus clementina; type=EST; length=705bpback to top |