CX288477
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A_YARLI (Histone H2A OS=Yarrowia lipolytica GN=HTA1 PE=3 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 56/75 (74.67%), Postives = 65/75 (86.67%), Query Frame = -3 Query: 374 LQVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKG-KGDIGSASQE 595 +++LEL+GNAARDNKK+RIVPRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLP+K KG KG ASQE Sbjct: 64 VEILELSGNAARDNKKSRIVPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPRKSAKGAKG----ASQE 134
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A_PHANO (Histone H2A OS=Phaeosphaeria nodorum GN=HTA1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 53/66 (80.30%), Postives = 59/66 (89.39%), Query Frame = -3 Query: 398 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGK-GKG 592 ++LELAGNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK K GKG Sbjct: 64 EILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTAKPGKG 129
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A_BOTFB (Histone H2A OS=Botryotinia fuckeliana (strain B05.10) GN=hta1 PE=3 SV=4) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 55/73 (75.34%), Postives = 61/73 (83.56%), Query Frame = -3 Query: 374 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 592 ++LELAGNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK K G ASQE Sbjct: 64 EILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTAKTAGG-KPASQE 135
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A8_ORYSI (Probable histone H2A.8 OS=Oryza sativa subsp. indica GN=OsI_036919 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = -3 Query: 401 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 592 +VLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG TIA+GGV+PNIHQ LLPKK G K Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGSSK 126
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A7_ORYSJ (Probable histone H2A.7 OS=Oryza sativa subsp. japonica GN=Os12g0438000 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = -3 Query: 401 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 592 +VLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG TIA+GGV+PNIHQ LLPKK G K Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGSSK 126
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A7_ORYSI (Probable histone H2A.7 OS=Oryza sativa subsp. indica GN=OsI_036922 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = -3 Query: 401 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 592 +VLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG TIA+GGV+PNIHQ LLPKK G K Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGSSK 126
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A1_ORYSJ (Probable histone H2A.1 OS=Oryza sativa subsp. japonica GN=Os07g0545300 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = -3 Query: 401 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 592 +VLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG TIA+GGV+PNIHQ LLPKK G K Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGSSK 126
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A1_ORYSI (Probable histone H2A.1 OS=Oryza sativa subsp. indica GN=OsI_26380 PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = -3 Query: 401 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 592 +VLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG TIA+GGV+PNIHQ LLPKK G K Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGSSK 126
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A2_CANGA (Histone H2A.2 OS=Candida glabrata GN=HTA2 PE=3 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 4.354e-23 Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = -3 Query: 374 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 592 ++LELAGNAARDNKK+RI+PRH+QLA+RND+EL+KLLG+VTIA GGVLPNIHQ LLPKK K SASQE Sbjct: 63 EILELAGNAARDNKKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK-----PSASQE 130
BLAST of CX288477 vs. ExPASy Swiss-Prot
Match: H2A1_CANGA (Histone H2A.1 OS=Candida glabrata GN=HTA1 PE=3 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 4.354e-23 Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = -3 Query: 374 QVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 592 ++LELAGNAARDNKK+RI+PRH+QLA+RND+EL+KLLG+VTIA GGVLPNIHQ LLPKK K SASQE Sbjct: 63 EILELAGNAARDNKKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK-----PSASQE 130 The following BLAST results are available for this feature:
BLAST of CX288477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288477 ID=CX288477; Name=CX288477; organism=Citrus clementina; type=EST; length=705bpback to top |