CX288489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA2_SCHPO (Tubulin alpha-2 chain OS=Schizosaccharomyces pombe GN=tub1 PE=1 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 9.314e-55 Identity = 93/133 (69.92%), Postives = 114/133 (85.71%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG Q+GNACWELYCLEHGIQP+G M + D F+TFFSETG GK+VPR+++VDLEP VID+VRTG YR LFHPEQLI+GKEDA+NN+ARGHYT+GKE+VD D+IR++ADNC+GLQGFLVF++ Sbjct: 8 HVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGKYVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTDKIRRIADNCSGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA_AJECA (Tubulin alpha chain (Fragment) OS=Ajellomyces capsulata GN=TUB1 PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 1.216e-54 Identity = 89/133 (66.92%), Postives = 114/133 (85.71%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 ++GQAG Q+ N+CWELYCLEHGIQPDG + ++ D FNTFFSETG GK+VPR ++ DLEP V+DEVRTG YR LFHPEQ+I+GKEDA+NN+ARGHYT+GKE++D CLD++R++ADNC+GLQGFLVF++ Sbjct: 8 NVGQAGGQIANSCWELYCLEHGIQPDGYLTEERKAADPDQGFNTFFSETGQGKYVPRTIYCDLEPNVVDEVRTGPYRALFHPEQMITGKEDASNNYARGHYTVGKEMIDQCLDKVRRVADNCSGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA_MYCGR (Tubulin alpha chain OS=Mycosphaerella graminicola PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 1.030e-53 Identity = 88/133 (66.17%), Postives = 113/133 (84.96%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 ++GQAG Q+ N+CWELYCLEHGIQPDG + ++ DD F+TFFSETG GK+VPR ++ DLEP V+DEVRTGTYR LFHPE +I+GKEDA+NN+ARGHYT+GKE++D LD++R +ADNC+GLQGFLVF++ Sbjct: 8 NVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAAEDDDGFSTFFSETGNGKYVPRTIYADLEPNVVDEVRTGTYRSLFHPELMITGKEDASNNYARGHYTVGKELIDQVLDKVRHVADNCSGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA_GIBZE (Tubulin alpha chain OS=Gibberella zeae GN=TUB1 PE=3 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 1.345e-53 Identity = 89/133 (66.92%), Postives = 112/133 (84.21%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 ++GQAG Q+ N+CWELYCLEHGIQPDG + ++ D F+TFFSETG GKHVPRA++ DLEP V+DEVRTG YR LFHPE +I+GKEDA+NN+ARGHYT+GKE++D LD+IR++ADNC GLQGFLVF++ Sbjct: 8 NVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAQDPDQGFSTFFSETGNGKHVPRAIYCDLEPNVVDEVRTGAYRNLFHPEMMITGKEDASNNYARGHYTVGKELIDGVLDKIRRVADNCAGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA2_CHICK (Tubulin alpha-2 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 2.996e-53 Identity = 94/133 (70.68%), Postives = 112/133 (84.21%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 HIGQAG+Q+GNACWEL+CLEH IQPDG + DD+F TFF ET K+VPRA+ VDLEPTV+DEVRTGTYR LFHPEQLI+GKEDAANN+ARGHYT+GK+ VD+ DRIRKLAD+C+GLQGFL+F++ Sbjct: 8 HIGQAGVQIGNACWELFCLEHSIQPDGTFSDPPS---SDDSFATFFRETSMSKYVPRAIMVDLEPTVVDEVRTGTYRHLFHPEQLITGKEDAANNYARGHYTVGKDKVDMVSDRIRKLADSCSGLQGFLIFHS 137
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 3.913e-53 Identity = 88/133 (66.17%), Postives = 112/133 (84.21%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 ++GQAG Q+ N+CWELYCLEHGIQPDG + ++ D F+TFFSETG GK+VPR ++ DLEP VIDEVRTG YR LFHPE +ISGKEDA+NN+ARGHYT+GKE++D LD++R++ADNC+GLQGFLVF++ Sbjct: 8 NVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPDHGFSTFFSETGNGKYVPRTIYADLEPNVIDEVRTGAYRGLFHPEHMISGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCSGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA2_NEUCR (Tubulin alpha-B chain OS=Neurospora crassa GN=tba-2 PE=2 SV=2) HSP 1 Score: 206.453 bits (524), Expect = 3.913e-53 Identity = 88/133 (66.17%), Postives = 112/133 (84.21%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 ++GQAG Q+ N+CWELYCLEHGIQPDG + ++ D F+TFFSETG GK+VPR ++ DLEP VIDEVRTG YR LFHPE +ISGKEDA+NN+ARGHYT+GKE++D LD++R++ADNC+GLQGFLVF++ Sbjct: 8 NVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPDHGFSTFFSETGNGKYVPRTIYADLEPNVIDEVRTGAYRGLFHPEHMISGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCSGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA_DICDI (Tubulin alpha chain OS=Dictyostelium discoideum GN=tubA PE=1 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 6.675e-53 Identity = 95/139 (68.35%), Postives = 117/139 (84.17%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFN----TFFSETGAGKHV-PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 HIGQAG+QVGN+CWELYCLEHGI+ DG +P+D+ + N TFFSE+ GK V PRA+F+DLEPTVIDE+RTG Y+ LFHPEQLI+GKEDAANN+ARGHYT+GKE++D+C+DRIR+LAD C GLQGFLVF++V Sbjct: 9 HIGQAGVQVGNSCWELYCLEHGIERDGSIPADRKQSSDVNNLNKDLGTFFSESTNGKKVVPRAIFLDLEPTVIDEIRTGDYKNLFHPEQLITGKEDAANNYARGHYTVGKELIDVCVDRIRRLADQCDGLQGFLVFHSV 147
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1_EMENI (Tubulin alpha-1 chain OS=Emericella nidulans GN=tubA PE=3 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 8.717e-53 Identity = 87/133 (65.41%), Postives = 113/133 (84.96%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 ++GQAG Q+ N+CWELYCLEHGIQPDG + ++ D F+TFFSETG GK+VPR ++ DLEP V+DEVRTGTYR LFHPE LI+GKEDA+NN+ARGHYT+GKE++D LD++R++AD+C+GLQGFLVF++ Sbjct: 8 NVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKKEDPDHGFSTFFSETGQGKYVPRTIYADLEPNVVDEVRTGTYRSLFHPENLITGKEDASNNYARGHYTVGKEMIDQVLDKVRRMADSCSGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1_SCHPO (Tubulin alpha-1 chain OS=Schizosaccharomyces pombe GN=nda2 PE=2 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 3.313e-52 Identity = 90/137 (65.69%), Postives = 114/137 (83.21%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGD----DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELYCLEHGI PDG + V + D F TFFSETG GK VPR+++VDLEP VID+VRTG Y+ LFHPEQ+++GKEDA+NN+ARGHYT+GKE++D L+RIR++ADNC+GLQGFLVF++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIGPDGFPTENSEVHKNNSYLNDGFGTFFSETGQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDSVLERIRRMADNCSGLQGFLVFHS 144 The following BLAST results are available for this feature:
BLAST of CX288489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 407
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288489 ID=CX288489; Name=CX288489; organism=Citrus clementina; type=EST; length=434bpback to top |