CX288489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA_ASHGO (Tubulin alpha chain OS=Ashbya gossypii GN=TUB1 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 7.380e-52 Identity = 93/129 (72.09%), Postives = 111/129 (86.05%), Query Frame = 1 Query: 4 IGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVG-GGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFL 387 +GQAG Q+GNACWELY LEHGI+PDG + T GG++ F+TFF+ETG+GK VPRAV+VDLEP VIDEVRTG YR+LFHPEQLISGKEDAANN+ARGHYT+G+E++D LDRIRK++D C GLQGFL Sbjct: 10 VGQAGCQIGNACWELYSLEHGIRPDGYLQEGLTKPKGGEEGFSTFFNETGSGKFVPRAVYVDLEPNVIDEVRTGAYRELFHPEQLISGKEDAANNYARGHYTVGRELLDDILDRIRKISDQCDGLQGFL 138
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 2.804e-51 Identity = 87/133 (65.41%), Postives = 113/133 (84.96%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELY +EHG+ PDG++ SD + DD F+TFFSET +GK+VPR+++VDLEP VIDEVR G YR LFHPE +I+GKEDAA+N+ARGHYTIGKE +D+ +D++R+L DNC GLQGF VF++ Sbjct: 8 HVGQAGVQIGNACWELYTIEHGLSPDGRL-SDDSPSKHDDGFSTFFSETSSGKYVPRSLYVDLEPNVIDEVRNGPYRSLFHPETMITGKEDAASNYARGHYTIGKEQIDVVMDKVRRLVDNCNGLQGFFVFHS 139
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA2_EMENI (Tubulin alpha-2 chain OS=Emericella nidulans GN=tubB PE=3 SV=2) HSP 1 Score: 196.052 bits (497), Expect = 5.289e-50 Identity = 90/138 (65.22%), Postives = 116/138 (84.06%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDD-----AFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 HIGQAG Q+GN+ WELY LEHG+ DG++ +K G+D +F TFF+ETG+GK+VPR++FVDL+P+ IDE+RTG YRQLFHPEQLISGKEDAANN+ARGHYT+GKE+VD +DR+R+L+DNC+ LQGFLVF++ Sbjct: 9 HIGQAGTQLGNSAWELYLLEHGLGADGRLDPEK----GEDINAGGSFETFFTETGSGKYVPRSIFVDLDPSPIDEIRTGPYRQLFHPEQLISGKEDAANNYARGHYTVGKELVDTVVDRVRRLSDNCSSLQGFLVFHS 142
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 6.907e-50 Identity = 88/130 (67.69%), Postives = 110/130 (84.62%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSD-KTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFL 387 ++GQAG Q+GNACWELY EHGI+PDG + GG++ F+TFFSETG+GK+VPRA++VDLEP VIDEVRTG Y+ LFHPEQLI+GKEDAANN+ARGHYT+G+EI+D LDR+R+++D C GLQGFL Sbjct: 8 NVGQAGCQIGNACWELYSQEHGIRPDGYLQEGLDRPKGGEEGFSTFFSETGSGKYVPRALYVDLEPNVIDEVRTGVYKDLFHPEQLIAGKEDAANNYARGHYTVGREILDDILDRVRRMSDQCDGLQGFL 137
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1_YEAST (Tubulin alpha-1 chain OS=Saccharomyces cerevisiae GN=TUB1 PE=1 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 1.178e-49 Identity = 91/130 (70.00%), Postives = 107/130 (82.31%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVG-GGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFL 387 ++GQAG Q+GNACWELY LEHGI+PDG + + GG++ F+TFF ETG GK VPRA++VDLEP VIDEVR G Y+ LFHPEQLISGKEDAANN+ARGHYT+G+EI+ LDRIRKLAD C GLQGFL Sbjct: 8 NVGQAGCQIGNACWELYSLEHGIKPDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPRAIYVDLEPNVIDEVRNGPYKDLFHPEQLISGKEDAANNYARGHYTVGREILGDVLDRIRKLADQCDGLQGFL 137
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBAL3_HUMAN (Tubulin alpha chain-like 3 OS=Homo sapiens GN=TUBAL3 PE=1 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 3.428e-49 Identity = 92/141 (65.25%), Postives = 114/141 (80.85%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDG--------QMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 HIGQAGIQ+G+ACWELYCLEHGIQP+G Q+ + K + + +F+TFF ET AGKHVPRA+FVDLEPTVID +RTG +R LFHPEQL+SGKEDAANN+ARG Y++G E++DL L+R RKLA+ C GLQGFL+F + Sbjct: 8 HIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAK-MEHTNASFDTFFCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSEVIDLVLERTRKLAEQCGGLQGFLIFRS 147
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBAB_SCHCO (Tubulin alpha-1B chain OS=Schizophyllum commune GN=TUB-1B PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 5.847e-49 Identity = 84/133 (63.16%), Postives = 109/133 (81.95%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELY LEHG+ PDG++ D D+ +TFFSETG GKHVPR ++VDLEP VID+V+ G YR LFHPE +I+GKEDAANN+ARGHYT+GKE++D +D++R+LADNC+G QG VF++ Sbjct: 8 HVGQAGVQIGNACWELYTLEHGLSPDGRLMDDSP--SKHDSGSTFFSETGQGKHVPRRLYVDLEPGVIDDVKNGPYRSLFHPETMITGKEDAANNYARGHYTVGKELIDPVMDKLRRLADNCSGRQGLFVFHS 138
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1_CHICK (Tubulin alpha-1 chain (Fragment) OS=Gallus gallus PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 5.847e-49 Identity = 90/101 (89.11%), Postives = 98/101 (97.03%), Query Frame = 1 Query: 97 KTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 +T+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGF VF++ Sbjct: 1 ETIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFSVFHS 101
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1_NEUCR (Tubulin alpha-A chain OS=Neurospora crassa GN=tba-1 PE=2 SV=3) HSP 1 Score: 191.815 bits (486), Expect = 9.974e-49 Identity = 86/133 (64.66%), Postives = 109/133 (81.95%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG Q+GN+ WELY LEHG+ DG+ D TV G +++TFF+E+ GK+VPR++FVDL+P+ IDE+RTG YRQLFHPE LISGKEDAANN+ARGHYT+GKE+ + LDRIRK+ DNC LQGFLVF++ Sbjct: 9 HLGQAGTQLGNSAWELYLLEHGLTQDGRKDPDSTVAGEGGSYDTFFTESSNGKYVPRSLFVDLDPSPIDEIRTGPYRQLFHPELLISGKEDAANNYARGHYTVGKEMAENVLDRIRKITDNCHSLQGFLVFHS 141
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 1.701e-48 Identity = 88/130 (67.69%), Postives = 108/130 (83.08%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVG-GGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFL 387 ++GQAG Q+GNACWELY LEHGI+ DG + + GG++ F+TFF ETG GK VPRA++VDLEP VIDEVRTG +++LFHPEQLI+GKEDAANN+ARGHYT+G+EIVD +RIRK+AD C GLQGFL Sbjct: 8 NVGQAGCQIGNACWELYSLEHGIKEDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPRAIYVDLEPNVIDEVRTGRFKELFHPEQLINGKEDAANNYARGHYTVGREIVDEVEERIRKMADQCDGLQGFL 137 The following BLAST results are available for this feature:
BLAST of CX288489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 407
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288489 ID=CX288489; Name=CX288489; organism=Citrus clementina; type=EST; length=434bpback to top |