CX288489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBB3_DROME (Tubulin beta-3 chain OS=Drosophila melanogaster GN=betaTub60D PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 6.510e-24 Identity = 56/132 (42.42%), Postives = 79/132 (59.85%), Query Frame = 1 Query: 7 GQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGA------GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 384 GQ G Q+G WE+ EHGI +G D + + + +++E A GK+VPRA+ +DLEP ++ VR+G Y QLF P+ + G+ A NN+A+GHYT G E+VD LD +RK +NC LQGF Sbjct: 10 GQCGNQIGAKFWEIISEEHGIDSNGIYVGDSDLQL--ERVSVYYNEASAVTRSSGGKYVPRAILLDLEPGTMESVRSGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRKECENCDCLQGF 139
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBB_USTVI (Tubulin beta chain OS=Ustilago violacea PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 8.502e-24 Identity = 57/129 (44.19%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 7 GQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGD---DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 384 GQ G Q+G WE+ EHGI GQ G D + N +++ETG GK+VPRAV VDL+P +D ++ G LF P+ + G+ A NN+A+GHYT G E+VD LD +RK A+ LQGF Sbjct: 10 GQCGNQIGTKFWEVVSEEHGIDGTGQY-----TGTSDLQLERINVYYNETGTGKYVPRAVLVDLKPGTMDVIQGGPLGGLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRKEAEGTDCLQGF 133
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBB_PESMI (Tubulin beta chain OS=Pestalotiopsis microspora GN=TUBB PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 8.502e-24 Identity = 54/132 (40.91%), Postives = 79/132 (59.85%), Query Frame = 1 Query: 7 GQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 GQ G Q+G A W+ EHG+ +G + + + +F+E K+VPRAV VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD +R+ A+ C LQGF + +++ Sbjct: 10 GQCGNQIGAAFWQTISGEHGLDSNGVYNGTSELQL--ERMSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEACDCLQGFQITHSL 139
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBB8_PANTR (Tubulin beta-8 chain OS=Pan troglodytes GN=TUBB8 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 8.502e-24 Identity = 54/127 (42.52%), Postives = 78/127 (61.42%), Query Frame = 1 Query: 4 IGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 384 IGQ G Q+G WE+ EH I G D + + N +++E G++VPRAV VDLEP +D VR+G + Q+F P+ I G+ A NN+A+GHYT G E+++ +D +RK A++C LQGF Sbjct: 9 IGQCGNQIGAKFWEVISDEHAINSAGTYHGDSHLQL--ERINVYYNEASGGRYVPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCGAGNNWAKGHYTEGAELMESVMDVVRKEAESCDCLQGF 133
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBB8_HUMAN (Tubulin beta-8 chain OS=Homo sapiens GN=TUBB8 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 8.502e-24 Identity = 54/127 (42.52%), Postives = 78/127 (61.42%), Query Frame = 1 Query: 4 IGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 384 IGQ G Q+G WE+ EH I G D + + N +++E G++VPRAV VDLEP +D VR+G + Q+F P+ I G+ A NN+A+GHYT G E+++ +D +RK A++C LQGF Sbjct: 9 IGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQL--ERINVYYNEASGGRYVPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCGAGNNWAKGHYTEGAELMESVMDVVRKEAESCDCLQGF 133
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBB2_DROME (Tubulin beta-2 chain OS=Drosophila melanogaster GN=betaTub85D PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 8.502e-24 Identity = 53/126 (42.06%), Postives = 75/126 (59.52%), Query Frame = 1 Query: 7 GQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 384 GQ G Q+G WE+ EH I G D + + N +++E K+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++ C LQGF Sbjct: 10 GQCGNQIGGKFWEVISDEHCIDATGTYYGDSDLQL--ERINVYYNEATGAKYVPRAILVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESEGCDCLQGF 133
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBB2_DROHY (Tubulin beta-2 chain OS=Drosophila hydei GN=betaTub85D PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 8.502e-24 Identity = 53/126 (42.06%), Postives = 75/126 (59.52%), Query Frame = 1 Query: 7 GQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 384 GQ G Q+G WE+ EH I G D + + N +++E K+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++ C LQGF Sbjct: 10 GQCGNQIGGKFWEVISDEHCIDATGTYYGDSDLQL--ERINVYYNEATGAKYVPRAILVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESEGCDCLQGF 133
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBB2_COLGR (Tubulin beta-2 chain OS=Colletotrichum graminicola GN=TUB2 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 8.502e-24 Identity = 54/132 (40.91%), Postives = 79/132 (59.85%), Query Frame = 1 Query: 7 GQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 GQ G Q+G A W+ EHG+ +G + + + +F+E K+VPRAV VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD +R+ A+ C LQGF + +++ Sbjct: 10 GQCGNQIGAAFWQNISGEHGLDSNGVYNGTSELQL--ERMSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSL 139
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBB2_COLGL (Tubulin beta-2 chain OS=Colletotrichum gloeosporioides GN=TUB2 PE=3 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 8.502e-24 Identity = 54/132 (40.91%), Postives = 79/132 (59.85%), Query Frame = 1 Query: 7 GQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 GQ G Q+G A W+ EHG+ +G + + + +F+E K+VPRAV VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD +R+ A+ C LQGF + +++ Sbjct: 10 GQCGNQIGAAFWQNISGEHGLDSNGVYNGTSELQL--ERMSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSL 139
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBB1_COLGR (Tubulin beta-1 chain OS=Colletotrichum graminicola GN=TUB1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 8.502e-24 Identity = 55/133 (41.35%), Postives = 80/133 (60.15%), Query Frame = 1 Query: 7 GQAGIQVGNACWELYCLEHGIQPDGQMP-SDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 GQ G QVG A W+ EHG+ DG SD+ + + +F+E K+VPRAV VDLEP +D +R+G F P+ ++ G+ A NN+A+GHYT G E+VD LD +R+ A+ C LQGF + +++ Sbjct: 10 GQCGNQVGTAFWQTIHGEHGLDQDGVFRGSDEQQS---ERLSVYFTEAAKQKYVPRAVLVDLEPATMDAIRSGPLGDFFRPDNMVYGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEACDSLQGFQITHSL 139 The following BLAST results are available for this feature:
BLAST of CX288489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 407
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288489 ID=CX288489; Name=CX288489; organism=Citrus clementina; type=EST; length=434bpback to top |