CX288489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBG1_ARATH (Tubulin gamma-1 chain OS=Arabidopsis thaliana GN=TUBG1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.338e-18 Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 4 IGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 +GQ G Q+G W+ CLEHGI DG + T GG D + FF + ++PRA+ +DLEP VI+ ++ G YR L++ E + A NN+A G++ GK + + +D I + AD L+GF++ +++ Sbjct: 10 VGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSI 141
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBB2_SUIBO (Tubulin beta-2 chain OS=Suillus bovinus GN=TUBB2 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.338e-18 Identity = 49/133 (36.84%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 7 GQAGIQVGNACWELYCLEHGIQPDGQMP-SDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 GQAG QVG A W + EHG+ G +D + T +G K+VPR+V VDLE V + +R+G QLF P+ + A NN+A+G+YT G E++D LD +R+ + LQGF + +++ Sbjct: 11 GQAGNQVGEAFWRMLLAEHGLDDAGMYKGNDPQQIARAGVYFTQVDSSGPTKYVPRSVQVDLESGVCNRLRSGPLGQLFRPDTYFTSDSGAGNNWAKGYYTEGAELIDGILDIVRRQCEATEALQGFQMIHSL 143
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBG_COPC7 (Tubulin gamma chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TUB4 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.972e-18 Identity = 47/135 (34.81%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 4 IGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 +GQ G Q+G W+ C EHGI +G + T GG D + FF + ++PRA+ VDLEP VI+ + Y L++PE + K+ A NN+A+G Y+ G+ I + ++ I + A+ L+GF+V +++ Sbjct: 10 LGQCGNQMGAVYWQRLCAEHGISSEGILEEWATEGG--DRKDVFFYQADDEHYIPRAILVDLEPRVINNILASPYANLYNPENIFVSKDGGGAGNNWAQG-YSAGERIYEDIMEMIDREAEGSDSLEGFMVMHSI 141
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBG2_DROME (Tubulin gamma-2 chain OS=Drosophila melanogaster GN=gammaTub37C PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 9.105e-18 Identity = 47/135 (34.81%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 4 IGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 +GQ G Q+G W+ CLEHGI PDG + T G D + FF + ++PRAV +DLEP VI+ + T Y +L++ E + K A NN+A G ++ G+++ + D + + AD L+GF++ +++ Sbjct: 10 LGQCGNQIGFEFWKRLCLEHGISPDGVLEDFAT--DGQDRKDVFFYQADDNHYIPRAVLIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSDSLEGFVLCHSI 141
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBG2_MAIZE (Tubulin gamma-2 chain OS=Zea mays GN=TUBG2 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.189e-17 Identity = 46/135 (34.07%), Postives = 78/135 (57.78%), Query Frame = 1 Query: 4 IGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 +GQ G Q+G W+ CLEHGI DG + T GG D + FF + +PR++ +DLEP VI+ ++ YR L++ E + + A NN+A G++ G+++VD +D + + AD L+GF++ +++ Sbjct: 10 VGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHFIPRSLLIDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIMDMVDREADGSDSLEGFVLCHSI 141
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBG2_EUPCR (Tubulin gamma-2 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.553e-17 Identity = 46/135 (34.07%), Postives = 78/135 (57.78%), Query Frame = 1 Query: 4 IGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGK--EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 +GQ G Q+G W+ C+EHGI P+G + ++ G+D + FF + +VPRAV +DLEP VI +++ Y L++PE K + A NN+A+G Y G + + ++ I + AD L+GF++ +++ Sbjct: 10 VGQCGNQIGMEFWKQLCMEHGISPEGIL--EEYALDGEDRKDVFFYQADDEHYVPRAVLIDLEPGVIKQIQNSPYSNLYNPENFFVSKTMDGAGNNWAKG-YCEGAKYEEEIIEMIDREADGSDSLEGFVLTHSI 141
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBG1_EUPCR (Tubulin gamma-1 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.553e-17 Identity = 45/135 (33.33%), Postives = 78/135 (57.78%), Query Frame = 1 Query: 4 IGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 +GQ G Q+G W+ C+EHGI P+G + ++ G+D + FF + +VPRAV +DLEP VI+ ++ Y L++PE + K A NN+ RG Y +++ + ++ I + AD L+GF++ +++ Sbjct: 10 VGQCGNQIGMEFWKQLCMEHGINPEGIL--EEYAQNGEDRKDVFFYQADDEHYVPRAVLIDLEPRVINGIQKSPYASLYNPENIFISKHGGGAGNNWGRG-YCDAEKVQEEIIEMIDREADGSDSLEGFVLTHSI 141
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBG_SCHJP (Tubulin gamma chain OS=Schizosaccharomyces japonicus GN=tug1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.028e-17 Identity = 47/134 (35.07%), Postives = 78/134 (58.21%), Query Frame = 1 Query: 7 GQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 GQ G QVG+ W+ CLEHGI PDG + T G D + FF ++ +++PRA+ +DLEP V++ + + TY L++PE + + A NN+A G Y ++I + +D I + A+ L+GF + +++ Sbjct: 11 GQCGNQVGSQFWQQLCLEHGICPDGTLEDFATEGL--DRKDVFFYQSDDTRYIPRAILLDLEPRVVNNILSDTYGSLYNPENIFVATDGGGAGNNWAHG-YAHAEKIFEDIVDMIDREAEGSDSLEGFSLLHSI 141
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBG_ENTHI (Tubulin gamma chain OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.028e-17 Identity = 46/137 (33.58%), Postives = 82/137 (59.85%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQ-LISGKEDAANNFARGHYTIGK--EIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 ++GQ G Q+G+ ++ C EHGI PDG + +++ + DD + FF + ++VPR++ +DLEP V+D +RT +R ++PE +I A N++A G+YT K EI ++ I + ++C L+GF +++ Sbjct: 9 NVGQCGNQLGSEFFKKICSEHGILPDGSLSTNEFI---DDRKDVFFYQADDQRYVPRSINIDLEPRVLDSIRTSEWRNFYNPENFIIPTNNGAGNSWANGYYTTEKMSEIEEI----IDREVEHCDSLEGFFFCHSI 138
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBG_USTVI (Tubulin gamma chain OS=Ustilago violacea GN=TUB4 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.649e-17 Identity = 44/134 (32.84%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 7 GQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 GQAG Q+G+ W C EHGI +G + T D + FF + ++PRAV +DLEP V+D +++G Y+ L++PE + A NN+A+G Y G+ + + ++ I + A+ L+GF++ +++ Sbjct: 11 GQAGNQIGSEFWSQLCAEHGISKEGVLEDWAT--DMTDRKDVFFYQADDEHYIPRAVMIDLEPRVLDSIKSGPYKNLYNPENFFYDPQGGGAGNNWAKG-YAAGERVYEEVMEMIDREAEGSDSLEGFMLLHSI 141 The following BLAST results are available for this feature:
BLAST of CX288489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 407
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288489 ID=CX288489; Name=CX288489; organism=Citrus clementina; type=EST; length=434bpback to top |