CX288495

Overview
NameCX288495
Unique NameCX288495
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length594
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.663e-19
Identity = 61/194 (31.44%), Postives = 98/194 (50.52%), Query Frame = 2
Query:   32 PQLPDFLPILTPL--------FRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQ---LGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            P + D  P L             R M + KE+ K+ +E     I  RK    KG+   S  +++        D L   E +G+++   L E EI  +  E+  AGT+T++++ EWA+  L+ + +   K+  EI+  +G +   +E D++ +PY+ AV+KE LR HPP   L+   AI+DT+  GY IP G  V
Sbjct:  183 PNISDIFPCLKMFDVQGLRKKMERDMGKGKEITKKFIE---ERIEERK----KGEKNRSIKDLL--------DVLIDFEGSGKDEPDKLSEDEITVIILEMFLAGTETTSSSVEWALTELLRHPQAMAKVKLEILQVIGPNKKFEECDIDSLPYMQAVLKEQLRLHPPLPLLIPRKAIQDTKFMGYDIPKGTQV 361          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.090e-19
Identity = 54/175 (30.86%), Postives = 89/175 (50.86%), Query Frame = 2
Query:   44 DFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPA 568
            DF+PIL P  R  ++  KE+++R+++        +  FVE+ +   S   M        +D +   +  G  ++ E  ++ +   +  A  +T+  + EW +  LV + +IQ+KL  EI   +G D  + E D  K+PYL AV+KETLR       L+ H  + D +L GY IPA
Sbjct:  226 DFIPILRPFLRGYLKLVKEVKERRLKLF------KDYFVEERKKLTSTKSMTEENFKCAIDHVLDAQQKG--EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPDIQKKLRAEIDRVLGPDHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLNDAKLAGYDIPA 392          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.090e-19
Identity = 48/121 (39.67%), Postives = 67/121 (55.37%), Query Frame = 2
Query:  218 YVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            +VD L  L      +L   +IV L  ++  AGTDT+++T EWAM  L+ N E   K   EI   +G+ G+V+E D+  +PYL AVVKET R HP    L+   A  D E+ G+ +P    V
Sbjct:  282 FVDVLLDLTEGDEAELNTNDIVHLLLDLFGAGTDTNSSTVEWAMAELLRNPETMVKAQAEIDCVIGQKGVVEESDISALPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQV 402          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.772e-18
Identity = 54/175 (30.86%), Postives = 92/175 (52.57%), Query Frame = 2
Query:   44 DFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPA 568
            DF+PIL P  +  ++  KE+++++ +        +  FV++ +   S   M +      +D +   +  G  ++ E  ++ +   +  A  +T+  + EWA+  LV + EIQ KL  E+V+ +G    V E D+ K+PYL AV+KETLR       L+ H  + D +LGGY IPA
Sbjct:  226 DFIPILRPFLKGYLKLCKEVKEKRFQLF------KDYFVDERKKLGSTKSMDNNQLKCAIDHILDAKDKG--EINEDNVLYIVENINVAAIETTLWSIEWAIAELVNHPEIQAKLRHELVSQLGPGVQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPA 392          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.772e-18
Identity = 55/175 (31.43%), Postives = 90/175 (51.43%), Query Frame = 2
Query:   44 DFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPA 568
            DF+PIL P  R  +R  KE+++R+++        +  FV++ +   S   M +      +D +  LE   + ++ E  ++ +   +  A  +T+  + EW +  LV + EIQ+KL  E+   +G    + E D  K+PYL AV+KETLR        L H  + D +LGGY IPA
Sbjct:  226 DFIPILRPFLRGYLRICKEVKERRLQLF------KDYFVDERKKFGSTKSMDNNSLKCAIDHI--LEAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELETVLGPGVQITEPDTYKLPYLQAVIKETLRLRMAIPLFLPHMNLHDAKLGGYDIPA 392          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.772e-18
Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 2
Query:  260 QLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            +     I  L  ++  AGTDT++ T EWAM  L+    I  K  +E+   +GK  +VKE+DV ++PYL  +VKE LR HPP   LL    +   EL GY+IPAG  V
Sbjct:  277 EFNHTNIKALFLDLFVAGTDTTSITIEWAMTELLRKPHIMSKAKEELEKVIGKGSIVKEDDVLRLPYLSCIVKEVLRLHPPSPLLLPRKVVTQVELSGYTIPAGTLV 383          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.314e-18
Identity = 52/120 (43.33%), Postives = 72/120 (60.00%), Query Frame = 2
Query:  218 YVDSLFGL-EPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFL-LSHAAIKDTELGGYSIPAG 571
            +VD L  L EP   +QL + +++ +  E+I  GTDT A   EW +  + L+  +Q K+ +E+ A VGK   V E+DV  M YL AVVKE LR HPPG  L  +  +I DT + GY +PAG
Sbjct:  295 FVDVLLSLPEP---DQLSDSDMIAVLWEMIFRGTDTVAVLIEWILARMALHPHVQSKVQEELDAVVGKARAVAEDDVAVMTYLPAVVKEVLRLHPPGPLLSWARLSINDTTIDGYHVPAG 411          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.022e-18
Identity = 53/175 (30.29%), Postives = 92/175 (52.57%), Query Frame = 2
Query:   44 DFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPA 568
            DF+PIL P  +  ++  KE+++ +++       + +  +   ++ N+ +E+   I     D +   +  G  ++ E  ++ +   +  A  +T+  + EW +  LV + EIQ+KL  EI   +G    V E D++K+PYL AVVKETLR       L+ H  + D +LGGY IPA
Sbjct:  226 DFIPILRPFLKGYLKICKEVKETRLKLFKDYFVDERKKLGSTKSTNNNNELKCAI-----DHILDAQRKG--EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQQKLRDEIDRVLGAGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPA 393          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.022e-18
Identity = 61/199 (30.65%), Postives = 98/199 (49.25%), Query Frame = 2
Query:   11 DVMLITSPQLPDFLP----ILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGK-DG----LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            +V L+    L D+ P    +   L R    +A+ L +R  +    LI+        G++  SE++ +  + +  +   +GL            +  +  ++  AG +TS  T E+ M  L+ N+ + EKL  E+   +G  DG    ++ EED+  MPYL A +KETLR HPP  FLL H +  D+E+ GY +PAG  V
Sbjct:  239 NVSLLAGFNLEDYFPPNMAMADVLLRLVSVKARRLNQRWNDVFDELIQEHVQSRPSGESEESEADFIHVLLS--IQQEYGLTT--------DNLKAILVDMFEAGIETSYLTLEYGMAELINNRHVMEKLQTEVRTTMGSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRV 427          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.947e-18
Identity = 54/175 (30.86%), Postives = 91/175 (52.00%), Query Frame = 2
Query:   44 DFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPA 568
            DF+PIL P  +  ++  KE+++ +++        +  FV++ +N  S     +      +D +   E  G  ++ E  ++ +   +  A  +T+  + EW +  LV + EIQ+K+  EI   +G    V E D++K+PYL AVVKETLR       L+ H  + D +LGGY IPA
Sbjct:  226 DFIPILRPFLKGYLKICKEVKETRLKLF------KDYFVDERKNIGSTKSTNNEGLKCAIDHILDAEKKG--EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQQKVRDEIDRVLGVGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPA 392          
The following BLAST results are available for this feature:
BLAST of CX288495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
C76A1_SOLME4.663e-1931.44Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
TCMO_RUTGR6.090e-1930.86Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
C76C2_ARATH6.090e-1939.67Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_ZINEL1.772e-1830.86Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_CATRO1.772e-1831.43Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
C76B1_HELTU1.772e-1842.067-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C78A3_SOYBN2.314e-1843.33Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
TCMO_SOYBN3.022e-1830.29Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
C71C2_MAIZE3.022e-1830.65Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
TCMO_PHAAU3.947e-1830.86Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]

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Properties
Property NameValue
Genbank descriptionC02001A10SK IF1 Citrus clementina cDNA clone C02001A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288495 ID=CX288495; Name=CX288495; organism=Citrus clementina; type=EST; length=594bp
CATACTAAAAGATGTAATGCTGATAACATCACCACAGCTTCCGGATTTCT
TGCCGATTCTCACTCCATTATTTCGCAGGCAAATGAGAGAAGCAAAGGAG
TTGAGGAAGAGACAAATGGAGTGCTTGGTTCCACTGATAAGGAACAGAAA
AGCTTTTGTAGAGAAAGGCCAAAACCCTAACTCAGAGTCAGAGATGGTGA
GTCCAATTGGTGCTGCTTATGTGGATTCATTGTTTGGGCTGGAGCCAACG
GGGAGAGAGCAGCTGGGGGAACAAGAGATTGTGACATTGTGTTCTGAAGT
GATCAGTGCAGGCACTGACACTAGCGCAACAACGGCCGAATGGGCAATGC
ATCACTTGGTGCTAAACCAGGAGATTCAAGAAAAGTTGTATAAAGAAATT
GTAGCTGCTGTGGGGAAAGATGGGCTTGTTAAAGAAGAAGATGTCGAGAA
AATGCCTTATCTCGATGCTGTCGTGAAGGAAACTCTCCGGCGGCACCCTC
CTGGCCATTTTCTGCTGTCTCACGCTGCCATAAAGGATACTGAGCTTGGC
GGGTACTCCATCCCGGCAGGTGTTCACGTGGAATTCTACACTGC
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