CX288495

Overview
NameCX288495
Unique NameCX288495
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length594
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: CP17A_SQUAC (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalus acanthias GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 34/106 (32.08%), Postives = 60/106 (56.60%), Query Frame = 2
Query:  263 LGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            L +  +V   +++  AG +TS+T   W + +L+ + E+Q+K+ +EI + +G +   K  D   M +L+A + E LR  P    L+ H A+ D+ +G Y+IP G  V
Sbjct:  290 LTDDHMVMTVADIFGAGVETSSTAFAWMIIYLIHHPEVQKKIQEEIDSNIGFERTPKMSDKGNMNFLNATIHEILRIQPVSPLLIPHVALADSSIGDYTIPKGTRV 395          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 36/141 (25.53%), Postives = 69/141 (48.94%), Query Frame = 2
Query:  158 VEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            +++ +N N  SE    +    VD L   +     +L +  I  +  ++   G +TS++  EW M  L+ N  + E+   E+       G V E ++ ++ YL +++KET+R HPP   L+   + +  ++ GY IP+   +
Sbjct:  263 IDEHKNRNRSSEEREAV-EDLVDVLLKFQKESEFRLTDDNIKAVIQDIFIGGGETSSSVVEWGMSELIRNPRVMEEAQAEVRRVYDSKGYVDETELHQLIYLKSIIKETMRLHPPVPLLVPRVSRERCQINGYEIPSKTRI 402          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 37/106 (34.91%), Postives = 55/106 (51.89%), Query Frame = 2
Query:  263 LGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            +    I  +  ++ +AGT+TS+TT  WAM  ++ N  +  K   E+  A        E DVE + YL  V+KET+R H P   L+     K+TE+ GY+IP    V
Sbjct:  288 INNDNIKAIIIDMFAAGTETSSTTTVWAMVEMLKNPRVLAKAQAEVREAFRNKVTFDENDVEDLKYLKLVIKETMRLHAPIPLLVPRECRKETEINGYTIPVKTKV 393          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C521A_DICDI (Probable cytochrome P450 521A1 OS=Dictyostelium discoideum GN=cyp521a1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 36/107 (33.64%), Postives = 59/107 (55.14%), Query Frame = 2
Query:  269 EQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAV---GKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            +  ++ +C +++    DT  T   W    ++  Q++Q K Y+EI+  +   G+D  V  ED++K+PY+D ++KE  R HP G   +   AI D  + GY IP G HV
Sbjct:  275 KDHVICICCDLLMGTKDTFNTIVLWFFVLMINYQDVQLKGYQEIIKVLECTGRDH-VTIEDIDKLPYIDGIIKEISRIHPAGPLSVPRTAINDIMINGYFIPKGCHV 380          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 40/174 (22.99%), Postives = 90/174 (51.72%), Query Frame = 2
Query:   44 DFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIP 565
            DF+P +  +  + ++   ++ +++ + L  L +  K   E   +     + +  + AA  ++  G+      QL    +  L  ++ +AGTDTS++  EWA+  ++ +++I  + ++E+   +G++  +++ D+  +PY  A+ KET R+HP     L   + +  E+ G+ IP
Sbjct:  238 DFIPYIAWMDLQGIQRDMKVIQKKFDVL--LNKMIKEHTESAHDRKDNPDFLDILMAATQENTEGI------QLNLVNVKALLLDLFTAGTDTSSSVIEWALAEMLNHRQILNRAHEEMDQVIGRNRRLEQSDIPNLPYFQAICKETFRKHPSTPLNLPRISTEACEVDGFHIP 403          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 2
Query:  278 IVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVA--AVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            + +L   V  A  +TS    E AM  L+ ++ + +KL  E+ A  A  K  +++E+D+  +PYL A +KE LR HPPG  LL H +  D ++ GY IPA   V
Sbjct:  320 VKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKKLQAEVRAYGAEKKLDMIREDDLSSLPYLKASMKEALRLHPPGPLLLPHYSTADCQIDGYHIPANPRV 422          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: CP27A_RABIT (Sterol 26-hydroxylase, mitochondrial OS=Oryctolagus cuniculus GN=CYP27A1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12
Identity = 40/109 (36.70%), Postives = 57/109 (52.29%), Query Frame = 2
Query:  260 QLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEF 586
            QL  +E +    E++ AG DT++ T  WA++HL  N EIQ  L KE+V  V    + + +D   MP L AV+KETLR +P           K+ E+GG+  P      F
Sbjct:  322 QLSPREALGSLPELLLAGVDTTSNTLTWALYHLSKNPEIQAALRKEVVGVVAAGQVPQHKDFAHMPLLKAVLKETLRLYPVIPANSRIIVDKEIEVGGFLFPKNTQFVF 430          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: CP17A_ORYLA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oryzias latipes GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.210e-12
Identity = 34/116 (29.31%), Postives = 62/116 (53.45%), Query Frame = 2
Query:  233 FGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            F  E  G   L +  ++    ++  AG +T+ T  +WA+ +L+   E+Q+++ +E+   VG D   +  D   +P+L+A ++E LR  P    L+ H A+ DT LG +++  G  V
Sbjct:  289 FSAEAVG---LSDDHLLMTVGDIFGAGVETTTTVLKWAITYLIHYPEVQKQIQEELDRKVGVDRPPQLSDRGSLPFLEATIREVLRIRPVAPLLIPHVALSDTSLGDFTVRKGTRV 401          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.210e-12
Identity = 38/116 (32.76%), Postives = 60/116 (51.72%), Query Frame = 2
Query:  221 VDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVG-KDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIP 565
            +D +      G  +L    I  + S++  AG +TSATT  WAM  L+ N  + +K+  E+   +G K   + E+D+ ++ Y   V+KET R HP    LL   A+   ++ GY IP
Sbjct:  274 IDMMNKQSQDGSFKLTTDHIKGIISDIFLAGVNTSATTILWAMTELIRNPRVMKKVQDEVRTVLGEKRDRITEQDLNQLNYFKLVIKETFRLHPAAPLLLPREAMAKIKIQGYDIP 389          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C5131_DICDI (Probable cytochrome P450 513A1 OS=Dictyostelium discoideum GN=cyp513a1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.417e-12
Identity = 56/204 (27.45%), Postives = 89/204 (43.63%), Query Frame = 2
Query:   32 PQLPDFLPILTPLF--RRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAV-------GKDGLVKEEDVEKM------------PYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            P + DF+P L P       +   K +     + L+   +N    +    N N++S    PI +  + S    E      +    +V+ C ++ +AG DTSA T  + +  L+ N  IQ K+Y +I  A+        ++    +E  E++            PYL  VVKET R++P G   L H   +D EL GY I AG  +
Sbjct:  213 PIISDFIPSLEPFIDTSNYLNTYKRIFNYTSD-LITKFKNENE-IHNNINDNNKSLADKPILSKLLQSFENGE------ISWDSVVSTCIDLQTAGADTSANTILYCLLELINNPNIQSKVYDDIKQAIIQSKENENQNDNENQEQTEEIITLSFNKYRTLAPYLSMVVKETFRKYPSGTIGLPHVTSEDVELNGYKICAGTQI 408          
The following BLAST results are available for this feature:
BLAST of CX288495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
CP17A_SQUAC3.237e-1232.08Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalu... [more]
C71DA_SOYBN3.237e-1225.53Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71D6_SOLCH3.237e-1234.91Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C521A_DICDI3.237e-1233.64Probable cytochrome P450 521A1 OS=Dictyostelium di... [more]
C75A6_CAMME4.227e-1222.99Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71C3_MAIZE4.227e-1237.86Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
CP27A_RABIT5.521e-1236.70Sterol 26-hydroxylase, mitochondrial OS=Oryctolagu... [more]
CP17A_ORYLA7.210e-1229.31Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oryzia... [more]
C71BN_ARATH7.210e-1232.76Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C5131_DICDI9.417e-1227.45Probable cytochrome P450 513A1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionC02001A10SK IF1 Citrus clementina cDNA clone C02001A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288495 ID=CX288495; Name=CX288495; organism=Citrus clementina; type=EST; length=594bp
CATACTAAAAGATGTAATGCTGATAACATCACCACAGCTTCCGGATTTCT
TGCCGATTCTCACTCCATTATTTCGCAGGCAAATGAGAGAAGCAAAGGAG
TTGAGGAAGAGACAAATGGAGTGCTTGGTTCCACTGATAAGGAACAGAAA
AGCTTTTGTAGAGAAAGGCCAAAACCCTAACTCAGAGTCAGAGATGGTGA
GTCCAATTGGTGCTGCTTATGTGGATTCATTGTTTGGGCTGGAGCCAACG
GGGAGAGAGCAGCTGGGGGAACAAGAGATTGTGACATTGTGTTCTGAAGT
GATCAGTGCAGGCACTGACACTAGCGCAACAACGGCCGAATGGGCAATGC
ATCACTTGGTGCTAAACCAGGAGATTCAAGAAAAGTTGTATAAAGAAATT
GTAGCTGCTGTGGGGAAAGATGGGCTTGTTAAAGAAGAAGATGTCGAGAA
AATGCCTTATCTCGATGCTGTCGTGAAGGAAACTCTCCGGCGGCACCCTC
CTGGCCATTTTCTGCTGTCTCACGCTGCCATAAAGGATACTGAGCTTGGC
GGGTACTCCATCCCGGCAGGTGTTCACGTGGAATTCTACACTGC
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