CX288495

Overview
NameCX288495
Unique NameCX288495
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length594
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11
Identity = 40/121 (33.06%), Postives = 65/121 (53.72%), Query Frame = 2
Query:  209 GAAYVDSLFGLEPTGREQ--LGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIP 565
            G   +D LF ++   + +  +    I     +  SAGT+TS+TT  W M  L+ N  +  K   E+ AA+     V  +DV+++ Y+ +VVKET+R HPP   L+  +  ++ E+ GY IP
Sbjct:  263 GEDIIDVLFRMQKDSQIKVPITTNAIKAFIFDTFSAGTETSSTTTLWVMAELMRNPAVMAKAQAEVRAALKGKTSVDVDDVQELKYMKSVVKETMRMHPPIP-LIPRSCREECEVNGYKIP 382          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11
Identity = 40/121 (33.06%), Postives = 65/121 (53.72%), Query Frame = 2
Query:  209 GAAYVDSLFGLEPTGREQ--LGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIP 565
            G   +D LF ++   + +  +    I     +  SAGT+TS+TT  W M  L+ N  +  K   E+ AA+     V  +DV+++ Y+ +VVKET+R HPP   L+  +  ++ E+ GY IP
Sbjct:  263 GEDIIDVLFRMQKDSQIKVPITTNAIKAFIFDTFSAGTETSSTTTLWVMAELMRNPAVMAKAQAEVRAALKGKTSVDVDDVQELKYMKSVVKETMRMHPPIP-LIPRSCREECEVNGYKIP 382          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11
Identity = 38/122 (31.15%), Postives = 63/122 (51.64%), Query Frame = 2
Query:  218 YVDSLFGLEPT----GREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG---LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSI 562
            +VD L  LE      G  +L    I  +   ++  G +TSA T  WAM  L+ N  + +K+  EI A +GK+    ++  +++  + YL+ V+KET R HP    L+    I + ++ GY+I
Sbjct:  267 FVDLLLRLEKEEAVLGYGKLTRNHIKAILMNILLGGINTSAITMTWAMAELIRNPRVMKKVQSEIRAQIGKNNKTRIISLDEINHLSYLNMVIKETCRLHPVAPLLVPREVISEFKINGYTI 388          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11
Identity = 34/110 (30.91%), Postives = 57/110 (51.82%), Query Frame = 2
Query:  251 GREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            G  ++ +  I  +  ++  AG DTS  T +W M  L  +  + +K+  EI   VG  G+V  +D+E + Y+  V+KET R H P   L+   A+ + ++ GY I  G  +
Sbjct:  288 GSSRITDTHIRAIIMDLFVAGVDTSVITLDWTMAELSRHPRVMKKVQAEIREHVGDKGIVTYDDLEALVYMKMVIKETWRLHAPSPILIPREAMTNFKIKGYDIYPGTRI 397          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C71AS_ARATH (Putative cytochrome P450 71A28 OS=Arabidopsis thaliana GN=CYP71A28 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11
Identity = 57/190 (30.00%), Postives = 92/190 (48.42%), Query Frame = 2
Query:    5 LKDVM-LITSPQLPDFLPILTPL--FRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLF-GLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSI 562
            L+ VM L+ +  + D++P L  +   R   R+ +E+ K  +E L  +++     V++G+N  +           +VD L   LE T   +L   +I  +  E    GT T+ T  +WAM  +V + E  +KL +EI         V EE+VE M YL AV+KE  R HPPG   +     +D  +  ++I
Sbjct:  208 LRKVMELLGAFPVGDYIPGLAWIDKVRGLDRKMEEVSKTFVEFLERVVQEH---VDEGENKETFD---------FVDILLIQLEKTNEFELERSDIRLIILEFFLGGTTTTFTAIDWAMTLVVRHPESMKKLQEEIQTYSRNKLYVPEEEVENMKYLKAVIKEVFRLHPPGPLSIPRQLSEDVFINAWAI 385          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C27C1_HUMAN (Cytochrome P450 27C1 OS=Homo sapiens GN=CYP27C1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11
Identity = 38/105 (36.19%), Postives = 61/105 (58.10%), Query Frame = 2
Query:  272 QEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHP--PGHFLLSHAAIKDTELGGYSIPAGVHV 580
            QEI    +E++ AG DT++ T  W ++ L  + E+Q+ +Y+EIV  +G+  +    DV K+P + A++KETLR  P  PG+        +D  +GGY IP G  +
Sbjct:  168 QEIYANVTEMLLAGVDTTSFTLSWTVYILARHPEVQQTVYREIVKNLGERHVPTAADVPKVPLVRALLKETLRLFPVLPGN---GRVTQEDLVIGGYLIPKGTQL 269          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: CP17A_PAPCY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio cynocephalus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.578e-11
Identity = 48/183 (26.23%), Postives = 89/183 (48.63%), Query Frame = 2
Query:   38 LPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGR--EQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            L D  P L     + + + K   K + + L  +  N K   EK ++ +S + M+  +  A ++S  G     +  E L +  I+T   ++  AG +T+ +  +W +  L+ N ++++KLY+EI   VG        D  ++  L+A ++E LR  P    L+ H A  D+ +G +++  G HV
Sbjct:  214 LVDLFPWLKVFPNKTLEKLKRHVKTRNDLLTKIFENYK---EKFRS-DSITNMLDVLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHV 392          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.578e-11
Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = 2
Query:  293 SEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKD-GLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIP 565
            + +  AG DT A T  WAM  LV N ++ +K+  EI   +G +   + EED++K+PYL  V+KET R HP    +L    +   ++ GY IP
Sbjct:  299 ANIFLAGIDTGALTMIWAMTELVKNPKLIKKVQGEIREQLGSNKARITEEDIDKVPYLKMVIKETFRLHPAAPLILPRETMAHIKVQGYDIP 390          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: CP17A_MACMU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca mulatta GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 47/186 (25.27%), Postives = 82/186 (44.09%), Query Frame = 2
Query:   38 LPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNS-----ESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            L D  P L     + + + K   K + + L  +  N K         N      +++M S  G A  D          E L +  I+T   ++  AG +T+ +  +W +  L+ N ++++KLY+EI   VG        D  ++  L+A ++E LR  P    L+ H A  D+ +G +++  G HV
Sbjct:  214 LVDLFPWLKVFPNKTLEKLKRHVKTRNDLLTKIFENYKEKFHSDSITNMLDVLMQAKMNSDNGNAGPDQ-------DSELLSDNHILTTIGDIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHV 392          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: CP17A_MACFA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca fascicularis GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 47/186 (25.27%), Postives = 82/186 (44.09%), Query Frame = 2
Query:   38 LPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNS-----ESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            L D  P L     + + + K   K + + L  +  N K         N      +++M S  G A  D          E L +  I+T   ++  AG +T+ +  +W +  L+ N ++++KLY+EI   VG        D  ++  L+A ++E LR  P    L+ H A  D+ +G +++  G HV
Sbjct:  214 LVDLFPWLKVFPNKTLEKLKRHVKTRNDLLTKIFENYKEKFHSDSITNMLDVLMQAKMNSDNGNAGPDQ-------DSELLSDNHILTTIGDIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHV 392          
The following BLAST results are available for this feature:
BLAST of CX288495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
C7D95_MENSP2.740e-1133.06Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR2.740e-1133.06Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71BA_ARATH2.740e-1131.15Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH2.740e-1130.91Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71AS_ARATH2.740e-1130.00Putative cytochrome P450 71A28 OS=Arabidopsis thal... [more]
C27C1_HUMAN2.740e-1136.19Cytochrome P450 27C1 OS=Homo sapiens GN=CYP27C1 PE... [more]
CP17A_PAPCY3.578e-1126.23Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio ... [more]
C71BK_ARATH3.578e-1138.04Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
CP17A_MACMU4.674e-1125.27Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]
CP17A_MACFA4.674e-1125.27Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]

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Properties
Property NameValue
Genbank descriptionC02001A10SK IF1 Citrus clementina cDNA clone C02001A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288495 ID=CX288495; Name=CX288495; organism=Citrus clementina; type=EST; length=594bp
CATACTAAAAGATGTAATGCTGATAACATCACCACAGCTTCCGGATTTCT
TGCCGATTCTCACTCCATTATTTCGCAGGCAAATGAGAGAAGCAAAGGAG
TTGAGGAAGAGACAAATGGAGTGCTTGGTTCCACTGATAAGGAACAGAAA
AGCTTTTGTAGAGAAAGGCCAAAACCCTAACTCAGAGTCAGAGATGGTGA
GTCCAATTGGTGCTGCTTATGTGGATTCATTGTTTGGGCTGGAGCCAACG
GGGAGAGAGCAGCTGGGGGAACAAGAGATTGTGACATTGTGTTCTGAAGT
GATCAGTGCAGGCACTGACACTAGCGCAACAACGGCCGAATGGGCAATGC
ATCACTTGGTGCTAAACCAGGAGATTCAAGAAAAGTTGTATAAAGAAATT
GTAGCTGCTGTGGGGAAAGATGGGCTTGTTAAAGAAGAAGATGTCGAGAA
AATGCCTTATCTCGATGCTGTCGTGAAGGAAACTCTCCGGCGGCACCCTC
CTGGCCATTTTCTGCTGTCTCACGCTGCCATAAAGGATACTGAGCTTGGC
GGGTACTCCATCCCGGCAGGTGTTCACGTGGAATTCTACACTGC
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