CX288495

Overview
NameCX288495
Unique NameCX288495
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length594
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 35/103 (33.98%), Postives = 55/103 (53.40%), Query Frame = 2
Query:  257 EQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIP 565
            E+L    I  L   + +AGTDTS++  EWA+  ++ N  I +K   E+   +G +  + E D+  +PYL A+ KET R+HP     L   + +   + GY IP
Sbjct:  284 ERLSTTNIKALLLNLFTAGTDTSSSAIEWALAEMMKNPAILKKAQGEMDQVIGNNRRLLESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDGYYIP 386          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = 2
Query:  209 GAAYVDSLFGLEPTGREQ--LGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIP 565
            G   +D LF ++   + +  +    I     +  SAGT+TS+TT  W M  L+ N E+  K   E+ AA+        +DV+++ Y+ +VVKET+R HPP   L+  +  ++ E+ GY+IP
Sbjct:  266 GEDIIDVLFRMQKDSQIKVPITTNAIKAFIFDTFSAGTETSSTTTLWVMAELMRNPEVMAKAQAEVRAALKGKTDWDVDDVQELKYMKSVVKETMRMHPPIP-LIPRSCREECEVNGYTIP 385          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 35/99 (35.35%), Postives = 55/99 (55.56%), Query Frame = 2
Query:  287 LCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVG-KDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            + S++  AG  TSA+T  WA+  LV N+++ +K+ +EI   +G K   + E+D+  + Y   VVKE  R HP   FLL    +   ++ GY IPA   +
Sbjct:  293 MISDIFLAGVSTSASTLIWAITELVRNRKVMKKVQEEIRTTLGDKKERITEQDLTNLHYFKLVVKEIFRLHPAVPFLLPRETLSHVKIQGYDIPAKTQI 391          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = 2
Query:  287 LCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDG-LVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIP 565
            L + +I AG DT A T  W M  L  N EI +K+  EI   +G +   + +ED++K+P+L+ V+KET R HP    LL    +   ++ GY IP
Sbjct:  297 LLTNIIIAGIDTGALTMIWTMTELARNPEIMKKVQGEIRDRLGNNRERITKEDLDKVPFLNLVIKETFRLHPVAPLLLPRETMAHVKVQGYDIP 390          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C516B_DICDI (Probable cytochrome P450 516B1 OS=Dictyostelium discoideum GN=cyp516b1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 49/195 (25.13%), Postives = 95/195 (48.72%), Query Frame = 2
Query:    2 ILKDVMLITSPQLPDFLPILTPLFRRQMRE-AKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLC-SEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            I+++++   +P   D+LP L P + ++    A  + +    C   +  +RK      + P    +++          L  +E +  +Q  + + ++ C +++I AG +T A T  W +  L  +Q++Q+K+Y E++  VGK  L      +   YL+A ++ET+R        L   A +D ++GGY+IP G  V
Sbjct:  197 IMEEILATGNPH--DYLPFLKPFYTKKRNTLAMAVGQVWDYCNDAITVHRKTLDH--EKPRDLLDLI----------LMEIEKSEEKQFYDDDSLSKCLTDLIVAGHETVAITLGWMILFLSNHQDVQQKVYDELINVVGKGNLPALVHRKDTSYLNACIQETMRIRTAAPLALPRIASEDIKVGGYTIPKGTQV 377          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: CP1A2_FELCA (Cytochrome P450 1A2 OS=Felis catus GN=CYP1A2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 46/174 (26.44%), Postives = 82/174 (47.13%), Query Frame = 2
Query:   44 DFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIP 565
            DF PIL  +    ++  K   ++ ++ L  +I+      +       E+ +    GA       G    G  ++  ++IV+L +++  AG DT  T   W++ +LV N E Q K+ +E+   VG+    +  D  ++PYL+A + E  R      F + H+  +DT L G+ IP
Sbjct:  233 DFFPILQYIPTPGLQRFKAFNQKLVQFLQKIIQEHYQDFD-------ENNIQDITGALLKHCKKGSRANGG-RIPHEKIVSLINDIFGAGFDTVTTAISWSLMYLVTNPEKQRKIQEELDTVVGRARRPRLSDRLQLPYLEASILEIFRHSSFIPFTVPHSTTRDTTLNGFYIP 398          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 37/122 (30.33%), Postives = 62/122 (50.82%), Query Frame = 2
Query:  221 VDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVG-KDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVE 583
            +D +   E +   +L    +  +  +V  AG DTSA T  WAM  L+ N  + +K  + I   +G K   + EED+ K+ YL+ ++KET R HP   F++    +   ++ GY IP    ++
Sbjct:  275 LDMIDKQEDSDSFKLNMDNLKAIVMDVFLAGIDTSAVTMIWAMTELIRNPRVMKKAQESIRTTLGLKKERITEEDLGKVEYLNHILKETFRLHPALPFVVPRETMSHIKIQGYDIPPKTQIQ 396          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: CP27B_HUMAN (25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial OS=Homo sapiens GN=CYP27B1 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.972e-11
Identity = 50/146 (34.25%), Postives = 71/146 (48.63%), Query Frame = 2
Query:  140 RNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAV--GKDGLVKEEDVEKMPYLDAVVKETLRRHP--PGHFLLSHAAIKDTELGGYSIP 565
            R  +A +  G  P  + E     GA     LF      RE+L  Q I+   +E++ AG DT + T  WA++ L  + E+Q  L+ EI AA+  G         + ++P L AVVKE LR +P  PG+   S    KD  +G Y IP
Sbjct:  271 REAEAAMRNGGQPEKDLES----GAHLTHFLF------REELPAQSILGNVTELLLAGVDTVSNTLSWALYELSRHPEVQTALHSEITAALSPGSSAYPSATVLSQLPLLKAVVKEVLRLYPVVPGN---SRVPDKDIHVGDYIIP 403          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: CP1A2_MOUSE (Cytochrome P450 1A2 OS=Mus musculus GN=Cyp1a2 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.972e-11
Identity = 50/184 (27.17%), Postives = 85/184 (46.20%), Query Frame = 2
Query:   23 ITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPI---GAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIP 565
            +TS    DF P+L  L    ++  K      +  L   ++       +  N NS  ++ S +      Y D+  GL P       E++IV + +++  AG DT  T   W++  LV    +Q K+++E+   VG+D   +  D  ++PYL+A + E  R      F + H+  +DT L G+ IP
Sbjct:  229 VTSGNAVDFFPVLRYLPNPALKRFKTFNDNFVLFLQKTVQEHY----QDFNKNSIQDITSALFKHSENYKDN-GGLIP-------EEKIVNIVNDIFGAGFDTVTTAITWSILLLVTWPNVQRKIHEELDTVVGRDRQPRLSDRPQLPYLEAFILEIYRYTSFVPFTIPHSTTRDTSLNGFHIP 400          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: CP1A2_CANFA (Cytochrome P450 1A2 OS=Canis familiaris GN=CYP1A2 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 7.972e-11
Identity = 44/184 (23.91%), Postives = 82/184 (44.57%), Query Frame = 2
Query:   14 VMLITSPQLPDFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIP 565
            V  ++S    DF PIL  +    ++  K   +  ++ L  +++            + +   V  I  A +             + +++IV L +++  AG DT  T   W++ +LV N EIQ ++ KE+   +G+    +  D  ++P ++A + E  R      F + H+  KDT L G+ IP
Sbjct:  223 VETVSSGNPLDFFPILQYMPNSALQRFKNFNQTFVQSLQKIVQEHYQ--------DFDERSVQDITGALLKHNEKSSRASDGHIPQEKIVNLINDIFGAGFDTVTTAISWSLMYLVANPEIQRQIQKELDTVIGRARQPRLSDRPQLPLMEAFILEIFRHTSFVPFTIPHSTTKDTTLKGFYIP 398          
The following BLAST results are available for this feature:
BLAST of CX288495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
C75A3_PETHY4.674e-1133.98Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C71DD_MENPI4.674e-1133.06Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71BT_ARATH4.674e-1135.35Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71BH_ARATH4.674e-1138.30Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C516B_DICDI4.674e-1125.13Probable cytochrome P450 516B1 OS=Dictyostelium di... [more]
CP1A2_FELCA6.104e-1126.44Cytochrome P450 1A2 OS=Felis catus GN=CYP1A2 PE=2 ... [more]
C71B2_ARATH6.104e-1130.33Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
CP27B_HUMAN7.972e-1134.2525-hydroxyvitamin D-1 alpha hydroxylase, mitochond... [more]
CP1A2_MOUSE7.972e-1127.17Cytochrome P450 1A2 OS=Mus musculus GN=Cyp1a2 PE=1... [more]
CP1A2_CANFA7.972e-1123.91Cytochrome P450 1A2 OS=Canis familiaris GN=CYP1A2 ... [more]

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Properties
Property NameValue
Genbank descriptionC02001A10SK IF1 Citrus clementina cDNA clone C02001A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288495 ID=CX288495; Name=CX288495; organism=Citrus clementina; type=EST; length=594bp
CATACTAAAAGATGTAATGCTGATAACATCACCACAGCTTCCGGATTTCT
TGCCGATTCTCACTCCATTATTTCGCAGGCAAATGAGAGAAGCAAAGGAG
TTGAGGAAGAGACAAATGGAGTGCTTGGTTCCACTGATAAGGAACAGAAA
AGCTTTTGTAGAGAAAGGCCAAAACCCTAACTCAGAGTCAGAGATGGTGA
GTCCAATTGGTGCTGCTTATGTGGATTCATTGTTTGGGCTGGAGCCAACG
GGGAGAGAGCAGCTGGGGGAACAAGAGATTGTGACATTGTGTTCTGAAGT
GATCAGTGCAGGCACTGACACTAGCGCAACAACGGCCGAATGGGCAATGC
ATCACTTGGTGCTAAACCAGGAGATTCAAGAAAAGTTGTATAAAGAAATT
GTAGCTGCTGTGGGGAAAGATGGGCTTGTTAAAGAAGAAGATGTCGAGAA
AATGCCTTATCTCGATGCTGTCGTGAAGGAAACTCTCCGGCGGCACCCTC
CTGGCCATTTTCTGCTGTCTCACGCTGCCATAAAGGATACTGAGCTTGGC
GGGTACTCCATCCCGGCAGGTGTTCACGTGGAATTCTACACTGC
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