CX288495

Overview
NameCX288495
Unique NameCX288495
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length594
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 5.155e-18
Identity = 52/175 (29.71%), Postives = 91/175 (52.00%), Query Frame = 2
Query:   44 DFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPA 568
            DF+PIL P  +  ++  KE++ R+++        +  FV++ +   S     +      +D +   +  G  ++ +  ++ +   +  A  +T+  + EW +  LV +QEIQ KL +E+   +G    V E D+EK+PYL AV+KETLR       L+ H  + D +LGG+ IPA
Sbjct:  226 DFIPILRPFLKGYLKVCKEVKDRRLQLF------KDYFVDERKKLGSTKSTYNEGLKCAIDHILDAQKKG--EINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQEIQNKLREEMDKVLGPGHQVTEPDLEKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPA 392          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.733e-18
Identity = 51/175 (29.14%), Postives = 93/175 (53.14%), Query Frame = 2
Query:   44 DFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPA 568
            DF+PIL P  +  ++  KE+++R+++       + +  +E  ++ ++E    +      +D +   +  G  ++ E  ++ +   +  A  +T+  + EW +  LV + EIQ+K+  EI   +G    V E D++K+PYL AV+KETLR       L+ H  + D +LGGY IPA
Sbjct:  226 DFIPILRPFLKGYLKICKEVKERRLKLFKDYFVDERMKLESTKSTSNEGLKCA------IDHILDAQKKG--EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKVRDEIDRVLGPGHQVTEPDMQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPA 392          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.733e-18
Identity = 44/103 (42.72%), Postives = 62/103 (60.19%), Query Frame = 2
Query:  263 LGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAG 571
            L + EI  L   + +AGTDTSA+T +WA+  L+ + +I  K  +E+   VG+D  V E D+ ++PYL AV+KE  R HPP    L H A +  E+ GY IP G
Sbjct:  287 LTDTEIKALLLNMFTAGTDTSASTVDWAIAELIRHPDIMVKAQEELDIVVGRDRPVNESDIAQLPYLQAVIKENFRLHPPTPLSLPHIASESCEINGYHIPKG 389          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 6.733e-18
Identity = 58/174 (33.33%), Postives = 83/174 (47.70%), Query Frame = 2
Query:   44 DFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIP 565
            D+LPIL     +  +E K + K   + L  L+   +   E               G   V+ L  L+    E   +  I  L   ++ AGT+TSA T EWAM +L+ N E+ EK   EI   +GKD L+ E D+  +PYL  VV ET R  P   FL+  +   D ++GGY +P
Sbjct:  227 DYLPILKLFGNKFEKEVKAIGKSMDDILQRLLDECRRDKE---------------GNTMVNHLISLQQQQPEYYTDVIIKGLMMSMMLAGTETSAVTLEWAMANLLRNPEVLEKARSEIDEKIGKDRLIDESDIAVLPYLQNVVSETFRLFPVAPFLIPRSPTDDMKIGGYDVP 385          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C79F1_ARATH (Dihomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.733e-18
Identity = 45/113 (39.82%), Postives = 61/113 (53.98%), Query Frame = 2
Query:  242 EPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            +  G+  +   EI   C E   A  D  A   EW +  ++ N EI  K  KE+   VG+D LV+E D+  + YL A  +ET R HP  H++ SH A +DT LGGY IP G H+
Sbjct:  307 DQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGRDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPSHLARQDTTLGGYFIPKGSHI 419          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: CP1A1_RAT (Cytochrome P450 1A1 OS=Rattus norvegicus GN=Cyp1a1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.794e-18
Identity = 51/176 (28.98%), Postives = 85/176 (48.30%), Query Frame = 2
Query:   44 DFLPILTPLFRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAG 571
            DF+PIL  L    +   K+L K+    +  LI+      EKG   +    ++       +D           QL + +++T+  ++  AG DT  T   W++ +LV N  IQ K+ +E+   +G+D   +  D  ++PYL+A + ET R      F + H+ I+DT L G+ IP G
Sbjct:  239 DFIPILRYLPNSSLDAFKDLNKKFYSFMKKLIKEHYRTFEKGHIRDITDSLIEHCQDRRLDE------NANVQLSDDKVITIVFDLFGAGFDTITTAISWSLMYLVTNPRIQRKIQEELDTVIGRDRQPRLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTIRDTSLNGFYIPKG 408          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.794e-18
Identity = 50/167 (29.94%), Postives = 90/167 (53.89%), Query Frame = 2
Query:   89 EAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQ---LGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            + + LRK+    +   +     F+++ +    E +  +  G  ++D L   + TG+++   L E EI     E+  AGT+T++++ EWA+  L+ + E   K+  EI  A+  +   ++ D+E +PY+ AV+KE+LR HPP  FL+    I+DT+  GY +P    V
Sbjct:  236 DLQSLRKKMARDMGKAVEIMSMFLKEREE---ERKKGTEKGKDFLDVLLEFQGTGKDEPAKLSEHEIKIFVLEMFLAGTETTSSSVEWALTELLRHPEAMAKVKTEISQAIEPNRKFEDSDIENLPYMQAVLKESLRLHPPLPFLIPRETIQDTKFMGYDVPKDTQV 399          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C79F2_ARATH (Hexahomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F2 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.148e-17
Identity = 45/113 (39.82%), Postives = 59/113 (52.21%), Query Frame = 2
Query:  242 EPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            +  G   +   EI   C E   A  D  A   EW +  ++ N EI  K  KE+   VGKD LV+E D+  + YL A  +ET R HP  H++  H A +DT LGGY IP G H+
Sbjct:  306 DQNGNYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIRNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHI 418          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.148e-17
Identity = 60/204 (29.41%), Postives = 103/204 (50.49%), Query Frame = 2
Query:    2 ILKDVMLITSPQLPDFLPILTPL--FRRQMREAKELRKRQMECLVPLIRN---RKAFVEKGQNPNSESEMVSPIGAAYVDSLFGLEPTGREQ--LGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHVEFYT 592
            + K + +    ++ D  P L PL    RQ  + + + +R  + L  ++R    ++  V++G    +E E +       VD L  L+ +G  +  +  + I  +   + +AGTDTSA+T EWAM  ++ N +++EK   E+        +++E D+E++ YL +V+KETLR HPP   L+    I  T + GY IP    V   T
Sbjct:  204 VRKAITMTGGFEVDDMFPSLKPLHLLTRQKAKVEHVHQRADKILEDILRKHMEKRTRVKEGNGSEAEQEDL-------VDVLLRLKESGSLEVPMTMENIKAVIWNIFAAGTDTSASTLEWAMSEMMKNPKVKEKAQAELRQIFKGKEIIRETDLEELSYLKSVIKETLRLHPPSQ-LIPRECIISTNIDGYEIPIKTKVMINT 399          
BLAST of CX288495 vs. ExPASy Swiss-Prot
Match: C79B2_ARATH (Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.500e-17
Identity = 58/186 (31.18%), Postives = 88/186 (47.31%), Query Frame = 2
Query:   38 LPDFLPILTPL----FRRQMREAKELRKRQMECLVPLIRNRKAFVEKGQNPNSESEMVSPIGAAYVDSLFGL-EPTGREQLGEQEIVTLCSEVISAGTDTSATTAEWAMHHLVLNQEIQEKLYKEIVAAVGKDGLVKEEDVEKMPYLDAVVKETLRRHPPGHFLLSHAAIKDTELGGYSIPAGVHV 580
            + D+LP+LT L      + MRE+  +  +  +   P+I  R     +G+    E          ++D    + +  G   L   EI     E++ A  D  +   EWAM  +V   EI  K  +EI   VGK+ LV+E D+ K+ Y+ A+++E  R HP   F L H A+ DT + GY IP G  V
Sbjct:  253 ISDYLPMLTGLDLNGHEKIMRESSAIMDKYHD---PIIDERIKMWREGKRTQIED---------FLDIFISIKDEQGNPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMVNKPEILRKAMEEIDRVVGKERLVQESDIPKLNYVKAILREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQV 426          
The following BLAST results are available for this feature:
BLAST of CX288495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
TCMO_PEA5.155e-1829.71Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_GLYEC6.733e-1829.14Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
F3PH_ARATH6.733e-1842.72Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C81F1_ARATH6.733e-1833.33Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C79F1_ARATH6.733e-1839.82Dihomomethionine N-hydroxylase OS=Arabidopsis thal... [more]
CP1A1_RAT8.794e-1828.98Cytochrome P450 1A1 OS=Rattus norvegicus GN=Cyp1a1... [more]
C76A2_SOLME8.794e-1829.94Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C79F2_ARATH1.148e-1739.82Hexahomomethionine N-hydroxylase OS=Arabidopsis th... [more]
C71D8_SOYBN1.148e-1729.41Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C79B2_ARATH1.500e-1731.18Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionC02001A10SK IF1 Citrus clementina cDNA clone C02001A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288495 ID=CX288495; Name=CX288495; organism=Citrus clementina; type=EST; length=594bp
CATACTAAAAGATGTAATGCTGATAACATCACCACAGCTTCCGGATTTCT
TGCCGATTCTCACTCCATTATTTCGCAGGCAAATGAGAGAAGCAAAGGAG
TTGAGGAAGAGACAAATGGAGTGCTTGGTTCCACTGATAAGGAACAGAAA
AGCTTTTGTAGAGAAAGGCCAAAACCCTAACTCAGAGTCAGAGATGGTGA
GTCCAATTGGTGCTGCTTATGTGGATTCATTGTTTGGGCTGGAGCCAACG
GGGAGAGAGCAGCTGGGGGAACAAGAGATTGTGACATTGTGTTCTGAAGT
GATCAGTGCAGGCACTGACACTAGCGCAACAACGGCCGAATGGGCAATGC
ATCACTTGGTGCTAAACCAGGAGATTCAAGAAAAGTTGTATAAAGAAATT
GTAGCTGCTGTGGGGAAAGATGGGCTTGTTAAAGAAGAAGATGTCGAGAA
AATGCCTTATCTCGATGCTGTCGTGAAGGAAACTCTCCGGCGGCACCCTC
CTGGCCATTTTCTGCTGTCTCACGCTGCCATAAAGGATACTGAGCTTGGC
GGGTACTCCATCCCGGCAGGTGTTCACGTGGAATTCTACACTGC
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