CX288497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 7.886e-29 Identity = 71/130 (54.62%), Postives = 85/130 (65.38%), Query Frame = 2 Query: 2 KNSLATSSKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGL 391 KN++ S KN E +G+ + VKVSMDGAPYLRK+DL Y Y EL ALE MF F++G+Y +D GS+FV TYEDKDGDWML+GDVPWEMFI TCKRLRIMK ++A GL Sbjct: 76 KNNIQ-SKKNESEHEGQG----IYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFK-FSVGEYFE--------------RDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGL 185
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.487e-27 Identity = 63/113 (55.75%), Postives = 81/113 (71.68%), Query Frame = 2 Query: 65 ALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMF-SCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPR 400 A LVKV++DGAPYLRKVDL ++ Y L AL MF SC + G G +KL DL+ G+E+V TYEDKDGDWMLVGDVPW+MF+ +CKR+R+MKS++A+ L+PR Sbjct: 83 AKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRGGGGGDGEG------TKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPR 189
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA31_ORYSJ (Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica GN=IAA31 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.537e-27 Identity = 65/126 (51.59%), Postives = 80/126 (63.49%), Query Frame = 2 Query: 14 ATSSKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGL 391 A ++ + + AG+ L VKVSMDGAPYLRK+DLK Y Y+EL ALE MF CF+ G ++ S+F +TYEDKDGD MLVGDVP+EMFI TCKRLRIMK ++A GL Sbjct: 82 AAAAAETQQKEDVAGAGGLFVKVSMDGAPYLRKIDLKVYKGYRELREALEAMFLCFSGGAAADAA---------------VNPSDFAVTYEDKDGDLMLVGDVPFEMFISTCKRLRIMKGSEARGL 192
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA4_PEA (Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA4/5 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.313e-27 Identity = 63/114 (55.26%), Postives = 75/114 (65.79%), Query Frame = 2 Query: 50 KAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGL 391 +A + VKVSMDGAPYLRK+DL+ Y Y EL ALE MF TIG+Y ++ GSE+ TYEDKDGDWMLVGDVPW+MF+ +CKRLRIMK T+A GL Sbjct: 87 EADVGGIFVKVSMDGAPYLRKIDLRVYGGYSELLKALETMFK-LTIGEYSE--------------REGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEAKGL 185
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: AX22D_PHAAU (Auxin-induced protein 22D OS=Phaseolus aureus GN=AUX22D PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 9.640e-27 Identity = 63/122 (51.64%), Postives = 77/122 (63.11%), Query Frame = 2 Query: 26 KNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGL 391 K +E +G + + VKVSM GAPYLRK+DLK Y Y EL ALE MF C G+Y ++ +GSE+ TYEDKDGDWMLVGDVPW MF+ +CKRLRIMK ++A GL Sbjct: 88 KKEEESEG----NGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCI-FGEYSE--------------REGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIMKGSEAKGL 190
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.259e-26 Identity = 66/130 (50.77%), Postives = 82/130 (63.08%), Query Frame = 2 Query: 2 KNSLATSSKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGL 391 KN++ T K+ E G VKVSMDGAPYLRK+DL Y +Y EL +LE MF F++G+Y ++ GS+FV TYEDKDGDWMLVGDVPWEMF+ +CKRLRIMK ++ GL Sbjct: 74 KNNVQTK-KSESEGQGN------YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFK-FSVGEYFE--------------REGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 181
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: AX22B_PHAAU (Auxin-induced protein 22B OS=Phaseolus aureus GN=AUX22B PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.644e-26 Identity = 65/124 (52.42%), Postives = 78/124 (62.90%), Query Frame = 2 Query: 20 SSKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGL 391 S + N +G+ + VKVSMDGAPYLRKVDLK Y Y EL ALE MF IG+Y ++ GSE+ TYEDKDGDWMLVGDVPW+MF+ +CKRLRIMK ++A GL Sbjct: 86 SYRKNSVQEGEG--DGIFVKVSMDGAPYLRKVDLKVYGGYPELLKALETMFK-LAIGEYSE--------------REGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGL 192
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA2_ARATH (Auxin-responsive protein IAA2 OS=Arabidopsis thaliana GN=IAA2 PE=2 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 2.805e-26 Identity = 67/125 (53.60%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 17 TSSKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGL 391 +S KNN+ V VKVSMDGAPYLRK+DLK Y Y EL ALE MF IG+Y ++ GS FV TYEDKDGDWMLVGDVPW+MF +CKRLRIMK +DA L Sbjct: 69 SSRKNNNSVS--------YVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVM-IGEYCE--------------REGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: AX22E_PHAAU (Auxin-induced protein 22E OS=Phaseolus aureus GN=AUX22E PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.663e-26 Identity = 64/130 (49.23%), Postives = 82/130 (63.08%), Query Frame = 2 Query: 2 KNSLATSSKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGL 391 KNSL K ++ DG + + +KVSM GAPYLRK+DLK Y Y EL AL+ +F C T G+Y ++ +GSE+ TYEDKDGDWMLVGDVPW MF+ +CKRLRI+K ++A GL Sbjct: 92 KNSL--QQKKVEQGDG----TGMYLKVSMAGAPYLRKIDLKVYKSYPELLKALQNLFKC-TFGEYSE--------------REGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIIKGSEAKGL 200
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA1_ARATH (Auxin-responsive protein IAA1 OS=Arabidopsis thaliana GN=IAA1 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.392e-25 Identity = 59/103 (57.28%), Postives = 70/103 (67.96%), Query Frame = 2 Query: 74 VKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDA 382 VKVSMDGAPYLRK+DLK Y Y EL ALE MF FT+G+Y ++ GS FV TYEDKDGDWMLVGDVPW+MF +C++LRIMK ++A Sbjct: 77 VKVSMDGAPYLRKIDLKMYKNYPELLKALENMFK-FTVGEYSE--------------REGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164 The following BLAST results are available for this feature:
BLAST of CX288497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288497 ID=CX288497; Name=CX288497; organism=Citrus clementina; type=EST; length=575bpback to top |