CX288497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA12_ORYSJ (Auxin-responsive protein IAA12 OS=Oryza sativa subsp. japonica GN=IAA12 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.290e-25 Identity = 71/150 (47.33%), Postives = 87/150 (58.00%), Query Frame = 2 Query: 2 KNSLATSSKNNDE-------VDGKAGSSAL------LVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGL-APRAVE 409 K+ A SS NN + A SSA LVKVSMDGAPYLRK+DL+ Y Y+EL ALE MF CF S D + SEF +TY+DKDGD MLVGDVP++MF TCK+LRIMK ++A GL +PR ++ Sbjct: 94 KSKAAVSSCNNKDEPITKNAAPAPAASSAAAANGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF------------------SGAADGANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMK 225
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: AUX22_SOYBN (Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.539e-24 Identity = 63/117 (53.85%), Postives = 77/117 (65.81%), Query Frame = 2 Query: 56 GSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDA--IGLAPR 400 G+S + VKVSMDGAP+LRK+DL + Y +L+ AL+K+F C YG M+ K D SE V YEDKDGDWMLVGDVPWEMF+ +CKRLRIMK +DA GL P+ Sbjct: 83 GASKMYVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLFGC-----YG--------MVEALKNAD---NSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKKSDAKGFGLQPK 183
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA6_PEA (Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA6 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.625e-24 Identity = 62/109 (56.88%), Postives = 70/109 (64.22%), Query Frame = 2 Query: 62 SALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIG 388 S + +KVSMDGAPYLRK+DL + Y EL+ ALEK+F C I E LKD E V YEDKDGDWMLVGDVPWEMFI +CKRLRIMK +DA G Sbjct: 74 SKMYMKVSMDGAPYLRKIDLCLHKGYLELALALEKLFDCCGI---------------EEALKDA-ENCEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKG 166
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA12_ARATH (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana GN=IAA12 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.625e-24 Identity = 64/131 (48.85%), Postives = 82/131 (62.60%), Query Frame = 2 Query: 20 SSKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 412 S K N +V G VKV+MDG RKVD++ +S Y+ L+ LE+MF +G G RE + +L D S+FVLTYEDK+GDWMLVGDVPW MFI + KRLRIM +++A GLAPR E+ Sbjct: 114 SMKVNPKVQGLG-----FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMF-------FGMTGTTCREKVKPLRLLD--GSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQ 230
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA26_ORYSJ (Auxin-responsive protein IAA26 OS=Oryza sativa subsp. japonica GN=IAA26 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 9.976e-24 Identity = 56/114 (49.12%), Postives = 68/114 (59.65%), Query Frame = 2 Query: 62 SALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRA 403 +A VKVSMDG PYLRKVD+ Y Y EL AL MF C TIG +G E + YED DGDWMLVGDVPWEMF+ +CKR+R+M++ +A GL+ A Sbjct: 44 AAYFVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIGLMDGYGEW-----------------EHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACEARGLSSNA 140
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 9.976e-24 Identity = 64/134 (47.76%), Postives = 83/134 (61.94%), Query Frame = 2 Query: 2 KNSLATSSKNNDEVDG-KAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPR 400 K + S D+ +G K G A VKV+MDG RKVDL + Y+ L+ ALE MF+ +IG SH + LK L + +E+ LTYED+DGDWMLVGDVPWEMF+ + KRLRIM+++DA GL R Sbjct: 141 KTATNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNT--------NSLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 9.976e-24 Identity = 64/134 (47.76%), Postives = 83/134 (61.94%), Query Frame = 2 Query: 2 KNSLATSSKNNDEVDG-KAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPR 400 K + S D+ +G K G A VKV+MDG RKVDL + Y+ L+ ALE MF+ +IG SH + LK L + +E+ LTYED+DGDWMLVGDVPWEMF+ + KRLRIM+++DA GL R Sbjct: 141 KTATNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNT--------NSLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: AX22A_PHAAU (Auxin-induced protein 22A OS=Phaseolus aureus GN=AUX22A PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 9.976e-24 Identity = 60/116 (51.72%), Postives = 77/116 (66.38%), Query Frame = 2 Query: 59 SSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDA--IGLAPR 400 +S + VKVSMDGAP+LRK+DL + Y +L+ ALEK+F C+ + + LK++ +G E V YEDKDGDWMLVGDVPWEMF+ +CKRLRIMK DA GL P+ Sbjct: 83 ASKMYVKVSMDGAPFLRKMDLGMHKGYSDLAFALEKLFGCYGMVE---------------ALKNVENG-EHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRADAKGFGLQPK 182
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: AX22C_PHAAU (Auxin-induced protein 22C OS=Phaseolus aureus GN=AUX22C PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.951e-23 Identity = 58/107 (54.21%), Postives = 69/107 (64.49%), Query Frame = 2 Query: 68 LLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIG 388 L VKVSMDGAP+LRK+DL + Y +L+ AL+K F C+ I + LKD +E V YEDKDGDWMLVGDVPWEMF +CKRLRIMK +DA G Sbjct: 80 LYVKVSMDGAPFLRKIDLAMHKGYSDLAFALDKFFGCYGICE---------------ALKDA-ENAEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMKRSDAKG 170
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA14_ORYSJ (Auxin-responsive protein IAA14 OS=Oryza sativa subsp. japonica GN=IAA14 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.881e-22 Identity = 57/125 (45.60%), Postives = 70/125 (56.00%), Query Frame = 2 Query: 14 ATSSKNNDEVDG--KAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDA 382 A K E D K L VKVSMDGAPYLRKVDL+ Y Y+EL AL+ +F CF+ S + F + YEDKDGD ML GDVPW+MFI +CK+LRIM+ ++A Sbjct: 89 AAKGKGGGETDQGRKNKGGGLYVKVSMDGAPYLRKVDLRMYGGYRELRDALDALFGCFSADASAS-------------------AAHFAVAYEDKDGDLMLAGDVPWDMFISSCKKLRIMRGSEA 194 The following BLAST results are available for this feature:
BLAST of CX288497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288497 ID=CX288497; Name=CX288497; organism=Citrus clementina; type=EST; length=575bpback to top |