CX288497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA5_ARATH (Auxin-responsive protein IAA5 OS=Arabidopsis thaliana GN=IAA5 PE=2 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 3.209e-22 Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 2 Query: 74 VKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMK 370 VKVS+DGA +LRK+DL+ Y YQ+L+SAL+ +F C+ D L SE V YEDKDGDWML GDVPWEMF+G+CKRLRIMK Sbjct: 77 VKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYI------------------NFDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMK 157
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 5.474e-22 Identity = 58/112 (51.79%), Postives = 71/112 (63.39%), Query Frame = 2 Query: 74 VKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVE 409 +KV+MDG RKVDL +S Y+ L+ LE MF G G L + +L D SEFVLTYEDK+GDWMLVGDVPW MFI + KRLR+MK+++A GLA R E Sbjct: 132 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVG----LTSQFTKPLRLLD--GSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQE 237
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA24_ORYSJ (Auxin-responsive protein IAA24 OS=Oryza sativa subsp. japonica GN=IAA24 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.338e-22 Identity = 57/124 (45.97%), Postives = 73/124 (58.87%), Query Frame = 2 Query: 14 ATSSKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFS-CFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDA 382 AT +++ + L VKVSMDGAPYLRKVDLK Y+EL AL+ +F+ CF+ + D +F + YEDKDGD MLVGDVPWEMFI +CK+LRIMK ++A Sbjct: 112 ATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCFS-----------------ATASDGCSDGQFAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEA 218
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA19_ARATH (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana GN=IAA19 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 9.338e-22 Identity = 57/115 (49.57%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 74 VKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDA--IGLAPRAVEK 412 VKVSMDG PYLRK+DL + Y +L+ AL+K+F IG G E+V YEDKDGDWML GDVPW MF+ +CKRLRIMK +DA GL PR V++ Sbjct: 99 VKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDG----------------DNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSDATGFGLQPRGVDE 197
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA6_ARATH (Auxin-responsive protein IAA6 OS=Arabidopsis thaliana GN=IAA6 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.220e-21 Identity = 56/121 (46.28%), Postives = 71/121 (58.68%), Query Frame = 2 Query: 26 KNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIG 388 KNN+E G VKVSMDG PY+RK+DL + + Y L + LE +F C IG + E K E+++ YEDKD DWMLVGDVPW+MF +CKRLRI+K +DA G Sbjct: 84 KNNEEASKAIG----YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIG-----------VAKEGKK------CEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATG 183
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.220e-21 Identity = 58/123 (47.15%), Postives = 78/123 (63.41%), Query Frame = 2 Query: 29 NNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSE-FVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLA 394 N + D +++ VKV+MDG P RK+DL + Y+ LS+ LE+MF +G L + E+ +K L GS VLTYEDK+GDWMLVGDVPW MFIG+ +RLRIMK+++A G A Sbjct: 124 NKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSR----TLETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKA 242
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA15_ARATH (Auxin-responsive protein IAA15 OS=Arabidopsis thaliana GN=IAA15 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.080e-21 Identity = 54/106 (50.94%), Postives = 70/106 (66.04%), Query Frame = 2 Query: 74 VKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGL 391 VKV++DGA YLRKVDL Y Y +L +ALE MF + +++ ++ +L EFV TYEDKDGD MLVGDVPW MF+ +CKR+R+MK+ DAIGL Sbjct: 89 VKVALDGAAYLRKVDLGMYDCYGQLFTALENMF---------------QGIITICRVTELERKGEFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA10_ARATH (Auxin-responsive protein IAA10 OS=Arabidopsis thaliana GN=IAA10 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.717e-21 Identity = 57/130 (43.85%), Postives = 80/130 (61.54%), Query Frame = 2 Query: 8 SLATSSKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTI-GQYGSHGALGREMLSESKLKDLLHGS-EFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGL 391 S+ ++KN+D K+ +++LVKV+MDG RKVDL Y L L+ MF F I G + + E+ LL GS E+++TY+DKDGDWMLVGDVPW+MF+G+ RLRIMK++ G+ Sbjct: 132 SVVVAAKNDDACFIKSSRTSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMF--FQIPSPVTRSNTQGYKTIKETCTSKLLDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGV 259
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA2_ORYSJ (Auxin-responsive protein IAA2 OS=Oryza sativa subsp. japonica GN=IAA2 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.348e-20 Identity = 51/123 (41.46%), Postives = 75/123 (60.98%), Query Frame = 2 Query: 14 ATSSKNNDEVDGKAGSS-ALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTD 379 ++S +N D+ G+ + VK++MDG P RKVDL Y Y +LS+A++K+F G + A + +++ G E+ L YED +GD MLVGDVPW+MFI T KRLR++KS+D Sbjct: 100 SSSPQNGDKASKDGGAEKGMFVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFR----GLLAAQSAAADGEADAAAAGEMVGGGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSD 218
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA18_ORYSJ (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica GN=IAA18 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.761e-20 Identity = 60/133 (45.11%), Postives = 79/133 (59.40%), Query Frame = 2 Query: 26 KNNDEVDGKAG---SSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKL-KDLLHGSE-FVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKST----DAIGLAP 397 + NDE D KA LVK++MDG P RKVDL+ Y YQ+LSSA+E++F F Q A E +E K+ LL G+ + L YED DGD ML GD+PW++F+ T KRLR+M+ + D IG P Sbjct: 193 RQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSELPHDMIGADP 325 The following BLAST results are available for this feature:
BLAST of CX288497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288497 ID=CX288497; Name=CX288497; organism=Citrus clementina; type=EST; length=575bpback to top |