CX288497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA26_ARATH (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.262e-18 Identity = 51/121 (42.15%), Postives = 73/121 (60.33%), Query Frame = 2 Query: 23 SKNND-EVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGS-EFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTD 379 +K++D E + + VK++MDG P RKVDL Y+ Y++LS ++K+F Q G E + LL G EF LTYED +GD MLVGDVPW+MF+ + KRLR++KS++ Sbjct: 136 NKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEE----KPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA6_ORYSJ (Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica GN=IAA6 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.648e-18 Identity = 55/138 (39.86%), Postives = 83/138 (60.14%), Query Frame = 2 Query: 2 KNSLATSSKN-------NDEVDGKAGSSAL---LVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKL-KDLLHGS-EFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTD 379 + +LA+SS + ND + K + LVK++MDG P RK+DL Y+ Y LSSA++++F F Q A + ++ K+ LL GS E+ L YED +GD MLVGDVPW++F+ T KRLR+++S++ Sbjct: 186 RRNLASSSSSKHSPEPQNDNANAKVTLTCKKNPLVKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSE 323
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA7_ORYSJ (Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica GN=IAA7 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.180e-18 Identity = 53/135 (39.26%), Postives = 82/135 (60.74%), Query Frame = 2 Query: 2 KNSLATSSKNNDEV-DGKAGSSAL------LVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSES-KLKDLLHGS-EFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTD 379 + +LATSSK + E+ +GK + A +K++MDG P RK+DL + Y++LS A++K+F Q A ++ E + LL G+ E+ L YED +GD +LVGDVPW MF+ + KRLR++K++D Sbjct: 149 RRNLATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSD 283
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA16_ORYSJ (Auxin-responsive protein IAA16 OS=Oryza sativa subsp. japonica GN=IAA16 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.060e-17 Identity = 55/144 (38.19%), Postives = 78/144 (54.17%), Query Frame = 2 Query: 2 KNSLATSSKNNDEVDG--------KAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCF-------TIGQYGSHGALGREMLSESK-LKDLLHGS--EFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTD 379 + +LA+SS ++ G G A VKV+MDG P RKVDL + Y ELS+A++++F T+ + A G E + + LL G E+ L YED +GD MLVGDVPW MFI +RLR+++S+D Sbjct: 68 RRNLASSSSSSKPPRGGRDAAAAATGGKVARFVKVNMDGVPIGRKVDLAAHGGYGELSAAVDRLFRGLLAAQRDPTMATAAAAAAAGESCTGEEEAIAGLLDGGSGEYTLVYEDDEGDQMLVGDVPWNMFIAAARRLRVLRSSD 211
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA18_ARATH (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana GN=IAA18 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.015e-16 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 2 Query: 2 KNSLATSSKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGS-EFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTD 379 KN ++ E + G + VK++M G P RKVDL ++ Y++LS ++K+F G + + E + LL G+ E+ LTYED +GD MLVGDVPW+MF+ + KRLR++K+++ Sbjct: 131 KNQKCDAAAKTTEPKRQGG---MFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFR----GLLAAQRDFPSSIEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 250
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA28_ARATH (Auxin-responsive protein IAA28 OS=Arabidopsis thaliana GN=IAA28 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.489e-16 Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 2 Query: 68 LLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPR 400 L VK++M+G P RKV+L Y+ YQ+LS A++++FS + DL ++ L YED +GD +LVGDVPWEMF+ T KRL ++K++ A L+PR Sbjct: 81 LYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFS-------------------KKDSWDL--NRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLSPR 170
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA25_ORYSJ (Auxin-responsive protein IAA25 OS=Oryza sativa subsp. japonica GN=IAA25 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15 Identity = 47/107 (43.93%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 50 KAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSE--FVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRI 364 + SS + VKV+++G RK+DLK + Y LS AL+ MF F S G R+ ++L+ + GS+ +VL YED +GD MLVGDVPWE+FI + KRL I Sbjct: 138 RRSSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFL-----SDGIATRD----NELQQMEEGSKKRYVLVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA8_ORYSJ (Auxin-responsive protein IAA8 OS=Oryza sativa subsp. japonica GN=IAA8 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.886e-14 Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 2 Query: 2 KNSLATSSKNNDEVDGKAGSS---ALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTD 379 ++SL T++ D G G +L VKV M+G P RK+DL Y+ L + L MF +I + H + +K+ VLTYED++GDWM+ GDVPWE+F+ + KRLRI ++ D Sbjct: 79 RSSLTTATVTADRGGGGGGHGRRRSLFVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRA-SITYHHCHRQFAVVGMKTNKV-------HHVLTYEDQEGDWMMAGDVPWELFLTSVKRLRIARADD 199
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA20_ARATH (Auxin-responsive protein IAA20 OS=Arabidopsis thaliana GN=IAA20 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.886e-14 Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 2 Query: 74 VKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKS 373 VKV+M+G P RK+DL + + Y++L L+ MF+ + ++ +D+ + VLTY DK+GDWM+VGDVPWEMF+ T +RL+I ++ Sbjct: 87 VKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILW---------------AEEEDMCNEKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKISRA 171
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA30_ARATH (Auxin-responsive protein IAA30 OS=Arabidopsis thaliana GN=IAA30 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.166e-14 Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 74 VKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKS 373 VKV+M+G P RK+DL + + Y +L + L+ MF+ + ++ +D+ VLTY DK+GDWM+VGDVPWEMF+ + +RL+I ++ Sbjct: 85 VKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILW---------------AEEEDMCSEKSHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISRA 169 The following BLAST results are available for this feature:
BLAST of CX288497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288497 ID=CX288497; Name=CX288497; organism=Citrus clementina; type=EST; length=575bpback to top |