CX288497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA31_ARATH (Auxin-responsive protein IAA31 OS=Arabidopsis thaliana GN=IAA31 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.085e-13 Identity = 43/107 (40.19%), Postives = 58/107 (54.21%), Query Frame = 2 Query: 50 KAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMK 370 + ++L VKV M+G P RK+DL +S Y+ L L MF I +D H VLTYEDKDGDWM+VGD+PW+MF+ T +RL+I + Sbjct: 67 RGDDTSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSII----------------CGNRDRKH---HVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITR 154
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA9_ORYSJ (Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica GN=IAA9 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.305e-12 Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = 2 Query: 50 KAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEF--VLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIM 367 +A A VKV +G RKVDL +S Y EL++ L +MF + E K+ + HG V+TYED DGDWMLVGDVPW+ F + KRL+I+ Sbjct: 87 RACGGANYVKVKKEGDAIGRKVDLALHSSYDELAATLARMFPT-------------NDHQGEKKMANDDHGDAAGPVVTYEDGDGDWMLVGDVPWDDFARSVKRLKIL 181
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA4_ORYSJ (Auxin-responsive protein IAA4 OS=Oryza sativa subsp. japonica GN=IAA4 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.329e-11 Identity = 41/101 (40.59%), Postives = 55/101 (54.46%), Query Frame = 2 Query: 68 LLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMK 370 L VKV M+G P RK+DL Y L L MF T Y +++ + + VLTYED+DGDWM+VGDVPWE+F+ + K+LRI + Sbjct: 109 LFVKVYMEGVPIGRKLDLLLLDGYDSLLIKLCHMFK--TPITYADVMECHQQVPGQK--------AAHVLTYEDQDGDWMMVGDVPWELFLSSVKKLRIAR 199
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA4_ORYSI (Auxin-responsive protein IAA4 OS=Oryza sativa subsp. indica GN=IAA4 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.329e-11 Identity = 41/101 (40.59%), Postives = 55/101 (54.46%), Query Frame = 2 Query: 68 LLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMK 370 L VKV M+G P RK+DL Y L L MF T Y +++ + + VLTYED+DGDWM+VGDVPWE+F+ + K+LRI + Sbjct: 109 LFVKVYMEGVPIGRKLDLLLLDGYDSLLIKLCHMFK--TPITYADVMECHQQVPGQK--------AAHVLTYEDQDGDWMMVGDVPWELFLSSVKKLRIAR 199
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA22_ORYSJ (Auxin-responsive protein IAA22 OS=Oryza sativa subsp. japonica GN=IAA22 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.329e-11 Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 29 NNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSE--FVLTYEDKDGDWMLVGDVPWE 331 + D + SS + VKV+++G RK+DLK + Y LS AL+ MF F S G R +++L+ + GS+ +VL YED +GD MLVGDVPW+ Sbjct: 79 SRDAAQERRPSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFL-----SDGIATR----DNELQRMEEGSKKRYVLVYEDNEGDRMLVGDVPWD 172
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA27_ORYSJ (Auxin-responsive protein IAA27 OS=Oryza sativa subsp. japonica GN=IAA27 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.678e-11 Identity = 40/102 (39.22%), Postives = 51/102 (50.00%), Query Frame = 2 Query: 68 LLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKS 373 + KV MDG RK++L+ + Y L L KM F S G E D EF+ YED +GD MLVGDVPWE+F+ + KRL I K+ Sbjct: 27 MFAKVHMDGYKVGRKINLRAHRNYDSLRRVLTKMTHNFFCPADYSSTNKGEE--------DCAKSDEFIFLYEDFEGDRMLVGDVPWELFLASAKRLYIAKN 120 The following BLAST results are available for this feature:
BLAST of CX288497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288497 ID=CX288497; Name=CX288497; organism=Citrus clementina; type=EST; length=575bpback to top |