CX288506
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_AGRVS (NADH-quinone oxidoreductase subunit B OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=nuoB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.167e-19 Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDR+VPVDIYVPGCPPTAEALLYG+L LQKK+ R Sbjct: 144 GYYHYSYSVVRGCDRVVPVDIYVPGCPPTAEALLYGVLLLQKKIRR 189
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_ACISJ (NADH-quinone oxidoreductase subunit B OS=Acidovorax sp. (strain JS42) GN=nuoB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.167e-19 Identity = 40/46 (86.96%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDRIVPVD+YVPGCPPTAEAL+YGI+QLQ+K+ R Sbjct: 107 GYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIIQLQQKIRR 152
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_ACIAC (NADH-quinone oxidoreductase subunit B OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=nuoB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.167e-19 Identity = 40/46 (86.96%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDRIVPVD+YVPGCPPTAEAL+YGI+QLQ+K+ R Sbjct: 107 GYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIIQLQQKIRR 152
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB1_RHIME (NADH-quinone oxidoreductase subunit B 1 OS=Rhizobium meliloti GN=nuoB1 PE=3 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 2.167e-19 Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDR+VPVDIYVPGCPPTAEALLYG+L LQKK+ R Sbjct: 141 GYYHYSYSVVRGCDRVVPVDIYVPGCPPTAEALLYGVLLLQKKIRR 186
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_RALME (NADH-quinone oxidoreductase subunit B OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=nuoB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.830e-19 Identity = 40/46 (86.96%), Postives = 44/46 (95.65%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEAL+YG++QLQ K+ R Sbjct: 107 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNKIKR 152
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_RALEJ (NADH-quinone oxidoreductase subunit B OS=Ralstonia eutropha (strain JMP134) GN=nuoB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.830e-19 Identity = 40/46 (86.96%), Postives = 44/46 (95.65%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEAL+YG++QLQ K+ R Sbjct: 107 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNKIKR 152
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_RALEH (NADH-quinone oxidoreductase subunit B OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=nuoB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.830e-19 Identity = 40/46 (86.96%), Postives = 44/46 (95.65%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEAL+YG++QLQ K+ R Sbjct: 107 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNKIKR 152
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_PELUB (NADH-quinone oxidoreductase subunit B OS=Pelagibacter ubique GN=nuoB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.830e-19 Identity = 41/47 (87.23%), Postives = 45/47 (95.74%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRR 141 GYYHYSYSVVRGCD+IVPVDIYVPGCPP+AEALLYGILQLQKK+ + Sbjct: 122 GYYHYSYSVVRGCDKIVPVDIYVPGCPPSAEALLYGILQLQKKIRNK 168
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_EHRCR (NADH-quinone oxidoreductase subunit B OS=Ehrlichia chaffeensis (strain Arkansas) GN=nuoB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.830e-19 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGI LQ+K+NR Sbjct: 122 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIFCLQQKINR 167
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_CUPTR (NADH-quinone oxidoreductase subunit B OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=nuoB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.830e-19 Identity = 40/46 (86.96%), Postives = 44/46 (95.65%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEAL+YG++QLQ K+ R Sbjct: 107 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNKIKR 152 The following BLAST results are available for this feature:
BLAST of CX288506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 242
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288506 ID=CX288506; Name=CX288506; organism=Citrus clementina; type=EST; length=432bpback to top |