CX288506
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_COXB1 (NADH-quinone oxidoreductase subunit B OS=Coxiella burnetii (strain CbuK_Q154) GN=nuoB PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.338e-18 Identity = 38/47 (80.85%), Postives = 43/47 (91.49%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRR 141 GYYHY+YSVVRGCDRIVPVD+YVPGCPPTAEAL YGI+QL+ K+ R Sbjct: 107 GYYHYAYSVVRGCDRIVPVDVYVPGCPPTAEALFYGIMQLRNKIRYR 153
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB2_BURP1 (Putative NADH-quinone oxidoreductase subunit B 2 OS=Burkholderia pseudomallei (strain 1710b) GN=nuoB2 PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.189e-17 Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRR 141 GYYHY YSVVRGCDRIVPVD+YVPGCPPTAEAL+Y ++QLQ+K+ R Sbjct: 109 GYYHYGYSVVRGCDRIVPVDVYVPGCPPTAEALVYDLMQLQRKVAER 155
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NDUS7_PARTE (NADH-ubiquinone oxidoreductase 20 kDa subunit OS=Paramecium tetraurelia GN=NAD10 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.741e-14 Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKM 132 GYYHYSY+VV+GCD+I+PVD+ P CPPTAEAL +G+LQLQK + Sbjct: 103 GYYHYSYAVVKGCDKIIPVDMLCPRCPPTAEALFFGVLQLQKTL 146
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NDUS7_TRYBB (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Trypanosoma brucei brucei GN=NDHK PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.716e-12 Identity = 26/44 (59.09%), Postives = 39/44 (88.64%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKM 132 GYYH+SY+V+RGC+R +PVD ++PGCPP+AE+L++ + LQKK+ Sbjct: 147 GYYHFSYAVLRGCERAIPVDFWIPGCPPSAESLVFCLHTLQKKI 190
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB2_SORC5 (NADH-quinone oxidoreductase subunit B 2 OS=Sorangium cellulosum (strain So ce56) GN=nuoB2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.172e-11 Identity = 28/50 (56.00%), Postives = 39/50 (78.00%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 150 G + Y+YSV +G D+I+PVD+YVPGCPP EALL G+L++Q+K+ R L Sbjct: 125 GLFQYAYSVCKGVDQIIPVDVYVPGCPPRPEALLEGLLKIQEKIKSERAL 174
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_RUBXD (NADH-quinone oxidoreductase subunit B OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=nuoB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.837e-11 Identity = 27/46 (58.70%), Postives = 37/46 (80.43%), Query Frame = 1 Query: 19 YSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYY 156 YSV+ G DR++PVD+YVPGCPP EAL++GI+ LQKK+ R + + Y Sbjct: 115 YSVLMGADRVIPVDVYVPGCPPRPEALIFGIMTLQKKIEREQQVGY 160
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB2_STRGG (NADH-quinone oxidoreductase subunit B 2 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=nuoB2 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 6.320e-11 Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 G Y SYSV +G D+I+PVD+YVPGCPP EALL GIL+LQ+K+ R Sbjct: 134 GPYWDSYSVTKGVDQIIPVDVYVPGCPPRPEALLQGILKLQEKIAR 179
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB2_STRCO (NADH-quinone oxidoreductase subunit B 2 OS=Streptomyces coelicolor GN=nuoB2 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 6.320e-11 Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 G Y SYSV +G D+I+PVD+YVPGCPP EALL GIL+LQ+K+ R Sbjct: 123 GPYWDSYSVTKGVDQIIPVDVYVPGCPPRPEALLQGILKLQEKIAR 168
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB2_STRAW (NADH-quinone oxidoreductase subunit B 2 OS=Streptomyces avermitilis GN=nuoB2 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 6.320e-11 Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 1 Query: 1 GYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 138 G Y SYSV +G D+I+PVD+YVPGCPP EALL GIL+LQ+K+ R Sbjct: 119 GPYWDSYSVTKGVDQIIPVDVYVPGCPPRPEALLQGILKLQEKIAR 164
BLAST of CX288506 vs. ExPASy Swiss-Prot
Match: NUOB_SULSY (NADH-quinone oxidoreductase subunit B OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=nuoB PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 8.254e-11 Identity = 25/44 (56.82%), Postives = 38/44 (86.36%), Query Frame = 1 Query: 16 SYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRD 147 +Y ++G DRI+PVD+Y+PGCPPT +ALL+GIL+LQKK+ +++ Sbjct: 108 TYPTLQGVDRIIPVDVYIPGCPPTPQALLWGILELQKKIKAKKE 151 The following BLAST results are available for this feature:
BLAST of CX288506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 242
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288506 ID=CX288506; Name=CX288506; organism=Citrus clementina; type=EST; length=432bpback to top |