CX288511

Overview
NameCX288511
Unique NameCX288511
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length274
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_BURM9 (Adenosylhomocysteinase OS=Burkholderia mallei (strain NCTC 10229) GN=ahcY PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.704e-18
Identity = 46/71 (64.79%), Postives = 55/71 (77.46%), Query Frame = -1
Query:    2 IKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 214
            IKPQ D  +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+     G+Y  KVYVLPK
Sbjct:  362 IKPQVDHIIFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTR--GGEYANKVYVLPK 429          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_BURM7 (Adenosylhomocysteinase OS=Burkholderia mallei (strain NCTC 10247) GN=ahcY PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.704e-18
Identity = 46/71 (64.79%), Postives = 55/71 (77.46%), Query Frame = -1
Query:    2 IKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 214
            IKPQ D  +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+     G+Y  KVYVLPK
Sbjct:  362 IKPQVDHIIFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTR--GGEYANKVYVLPK 429          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_LEIDO (Adenosylhomocysteinase OS=Leishmania donovani PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.838e-18
Identity = 45/79 (56.96%), Postives = 57/79 (72.15%), Query Frame = -1
Query:    2 KRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEK----KVYVLPK 226
            + + IKPQ DR+   E    II+LA+GRL+NLGCA+GHPSFVMS SFTNQV+AQ+ELW  +  GKY +     V+ LPK
Sbjct:  316 EHVEIKPQVDRYTM-ENGRHIILLAKGRLVNLGCASGHPSFVMSNSFTNQVLAQIELWSNRDNGKYPRGDKAGVFFLPK 393          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_SYNSC (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9605) GN=ahcY PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.318e-18
Identity = 51/87 (58.62%), Postives = 61/87 (70.11%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            +DV  L+ Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPK
Sbjct:  352 IDVASLKEYEWEN---IKPQVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGD--EYAKEVYVLPK 432          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPW (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH7803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.318e-18
Identity = 51/87 (58.62%), Postives = 62/87 (71.26%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            +DV  L+ Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y K+VYVLPK
Sbjct:  352 IDVASLKDYEWEN---IKPQVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGN--EYGKEVYVLPK 432          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_STRAA (Adenosylhomocysteinase OS=Streptomyces argillaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.318e-18
Identity = 47/87 (54.02%), Postives = 59/87 (67.82%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            +D+ GL   PG+ +  IKPQ   W FP+    IIVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +   G Y   VY LPK
Sbjct:  355 IDMAGLAKVPGIVKDEIKPQVHTWTFPDGKK-IIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTK--PGDYPTGVYTLPK 438          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_RHOP2 (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain HaA2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.318e-18
Identity = 44/71 (61.97%), Postives = 54/71 (76.06%), Query Frame = -1
Query:    2 IKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 214
            IKPQ D   FP+    +I+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK
Sbjct:  358 IKPQVDEITFPD-GKRMILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPK 427          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_PROM3 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.318e-18
Identity = 51/87 (58.62%), Postives = 60/87 (68.97%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            +DV  L+ Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    KY  +VYVLPK
Sbjct:  352 IDVASLKDYSWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFSKGD--KYADQVYVLPK 432          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_COREF (Adenosylhomocysteinase OS=Corynebacterium efficiens GN=ahcY PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.318e-18
Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            +D+  L     V R TIKPQ D + FP   S IIVL+EGRL+NLG ATGHPSFVMS SF +Q IAQ+EL++ +  G+YE +VY LPK
Sbjct:  351 IDMHSLLHRDDVIRTTIKPQVDEFTFPNGKS-IIVLSEGRLLNLGNATGHPSFVMSTSFADQTIAQIELFQNE--GQYENQVYRLPK 434          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPX (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH8102) GN=ahcY PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.252e-18
Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            +DV  L+ Y   +   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y K+VYVLPK
Sbjct:  352 IDVASLKGY---EWDNIKPQVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGN--EYGKEVYVLPK 432          
The following BLAST results are available for this feature:
BLAST of CX288511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
SAHH_BURM93.704e-1864.79Adenosylhomocysteinase OS=Burkholderia mallei (str... [more]
SAHH_BURM73.704e-1864.79Adenosylhomocysteinase OS=Burkholderia mallei (str... [more]
SAHH_LEIDO4.838e-1856.96Adenosylhomocysteinase OS=Leishmania donovani PE=3... [more]
SAHH_SYNSC6.318e-1858.62Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_SYNPW6.318e-1858.62Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_STRAA6.318e-1854.02Adenosylhomocysteinase OS=Streptomyces argillaceus... [more]
SAHH_RHOP26.318e-1861.97Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_PROM36.318e-1858.62Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_COREF6.318e-1857.47Adenosylhomocysteinase OS=Corynebacterium efficien... [more]
SAHH_SYNPX8.252e-1858.62Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC02001C03SK IF1 Citrus clementina cDNA clone C02001C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288511 ID=CX288511; Name=CX288511; organism=Citrus clementina; type=EST; length=274bp
GCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTGCTCTTCTCC
TTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGAACAGGACAT
CACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGAGACGTCCCT
CAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACCCACCTATCA
GTTTGGGGCTTGATGGTAATGCGCTTAACACCCGGGTAGGTCTCAAGACC
GAGCACATCAAGGGGGGGCCCGGT
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