CX288511

Overview
NameCX288511
Unique NameCX288511
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length274
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_METS4 (Adenosylhomocysteinase OS=Methylobacterium sp. (strain 4-46) GN=ahcY PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.078e-17
Identity = 49/87 (56.32%), Postives = 61/87 (70.11%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            + V GL+    +K   IKPQ D   FP+ +  II+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+ELW  +  GKYE +VY LPK
Sbjct:  344 IQVAGLKN---LKWSNIKPQVDEIEFPDGHR-IILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELWTNQ--GKYENQVYTLPK 424          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_METCA (Adenosylhomocysteinase OS=Methylococcus capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.078e-17
Identity = 48/71 (67.61%), Postives = 54/71 (76.06%), Query Frame = -1
Query:    2 IKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 214
            IKPQ D  V P     II+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+   +  KYE KVYVLPK
Sbjct:  361 IKPQVDHIVLPNGRR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFCHGA--KYENKVYVLPK 428          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_RHIEC (Adenosylhomocysteinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ahcY PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.408e-17
Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = -1
Query:    2 VKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 229
            +K   +KPQ D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+ +   G+YE KVY+LPK
Sbjct:  350 LKWTNVKPQVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELFTK--PGQYENKVYILPK 422          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_RHIE6 (Adenosylhomocysteinase OS=Rhizobium etli (strain CIAT 652) GN=ahcY PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.408e-17
Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = -1
Query:    2 VKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 229
            +K   +KPQ D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+ +   G+YE KVY+LPK
Sbjct:  350 LKWTNVKPQVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELFTK--PGQYENKVYILPK 422          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_DROME (Adenosylhomocysteinase OS=Drosophila melanogaster GN=Ahcy13 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.408e-17
Identity = 44/75 (58.67%), Postives = 58/75 (77.33%), Query Frame = -1
Query:    2 KRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 226
            +++ +KPQ DR+   ++   II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW +  + KY   V+VLPK
Sbjct:  317 EKVNVKPQVDRYTM-QSGKHIILLAEGRLVNLGCAHGHPSFVMSNSFTNQVLAQIELWTK--SDKYAVGVHVLPK 388          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_METPB (Adenosylhomocysteinase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=ahcY PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.838e-17
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            + V GL+    +K   IKPQ D   F + +  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW   + GKYE++VY LPK
Sbjct:  344 IQVAGLKN---LKWQNIKPQVDEIEFADGHR-IILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELW--TNPGKYERQVYTLPK 424          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_METEP (Adenosylhomocysteinase OS=Methylobacterium extorquens (strain PA1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.838e-17
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            + V GL+    +K   IKPQ D   F + +  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW   + GKYE++VY LPK
Sbjct:  344 IQVAGLKN---LKWQNIKPQVDEIEFADGHR-IILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELW--TNPGKYERQVYTLPK 424          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_METC4 (Adenosylhomocysteinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=ahcY PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.838e-17
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            + V GL+    +K   IKPQ D   F + +  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW   + GKYE++VY LPK
Sbjct:  344 IQVAGLKN---LKWQNIKPQVDEIEFADGHR-IILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELW--TNPGKYERQVYTLPK 424          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_STRAZ (Adenosylhomocysteinase OS=Streptomyces atroolivaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.401e-17
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            +D+ GL   PG+ +  +KPQ   W FP+    +IVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLPK
Sbjct:  342 IDMAGLAQIPGIVKDEVKPQVHTWKFPD-GKVLIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTKPD--EYPTDVYVLPK 425          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_STRAW (Adenosylhomocysteinase OS=Streptomyces avermitilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.401e-17
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            +D+ GL   PG+ +  +KPQ   W FP+    +IVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLPK
Sbjct:  358 IDMAGLAQIPGIVKDEVKPQVHTWKFPD-GKVLIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTKPD--EYPTDVYVLPK 441          
The following BLAST results are available for this feature:
BLAST of CX288511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
SAHH_METS41.078e-1756.32Adenosylhomocysteinase OS=Methylobacterium sp. (st... [more]
SAHH_METCA1.078e-1767.61Adenosylhomocysteinase OS=Methylococcus capsulatus... [more]
SAHH_RHIEC1.408e-1760.53Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_RHIE61.408e-1760.53Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_DROME1.408e-1758.67Adenosylhomocysteinase OS=Drosophila melanogaster ... [more]
SAHH_METPB1.838e-1756.32Adenosylhomocysteinase OS=Methylobacterium populi ... [more]
SAHH_METEP1.838e-1756.32Adenosylhomocysteinase OS=Methylobacterium extorqu... [more]
SAHH_METC41.838e-1756.32Adenosylhomocysteinase OS=Methylobacterium chlorom... [more]
SAHH_STRAZ2.401e-1751.72Adenosylhomocysteinase OS=Streptomyces atroolivace... [more]
SAHH_STRAW2.401e-1751.72Adenosylhomocysteinase OS=Streptomyces avermitilis... [more]

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Properties
Property NameValue
Genbank descriptionC02001C03SK IF1 Citrus clementina cDNA clone C02001C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288511 ID=CX288511; Name=CX288511; organism=Citrus clementina; type=EST; length=274bp
GCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTGCTCTTCTCC
TTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGAACAGGACAT
CACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGAGACGTCCCT
CAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACCCACCTATCA
GTTTGGGGCTTGATGGTAATGCGCTTAACACCCGGGTAGGTCTCAAGACC
GAGCACATCAAGGGGGGGCCCGGT
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