CX288511

Overview
NameCX288511
Unique NameCX288511
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length274
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:1179..1452. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_JANMA (Adenosylhomocysteinase OS=Janthinobacterium sp. (strain Marseille) GN=ahcY PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.724e-16
Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = -1
Query:    2 IKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 214
            IKPQ D  +FP+    II+LAEGRL+NLGC TGHPS+VMS SF NQ IAQ+EL+   +T  Y   VY LPK
Sbjct:  368 IKPQVDHIIFPD-GKRIILLAEGRLVNLGCGTGHPSYVMSSSFANQTIAQIELY--ANTKNYPVGVYTLPK 435          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_HERAR (Adenosylhomocysteinase OS=Herminiimonas arsenicoxydans GN=ahcY PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.724e-16
Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = -1
Query:    2 IKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 214
            IKPQ D  +FP+    II+LAEGRL+NLGC TGHPS+VMS SF NQ IAQ+EL+   +T  Y   VY LPK
Sbjct:  368 IKPQVDHIIFPD-GKRIILLAEGRLVNLGCGTGHPSYVMSSSFANQTIAQIELY--ANTKNYPVGVYTLPK 435          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_BORPD (Adenosylhomocysteinase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=ahcY PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.724e-16
Identity = 44/71 (61.97%), Postives = 53/71 (74.65%), Query Frame = -1
Query:    2 IKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 214
            IKPQ D  VFP+    II+LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+  ++      +VYVLPK
Sbjct:  360 IKPQVDHVVFPD-GKRIILLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELY-TRNEAYTRGQVYVLPK 428          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_ROSDO (Adenosylhomocysteinase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=ahcY PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.317e-15
Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = -1
Query:    2 KRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 226
            K   IK Q D    P  N  +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+ELW       Y+ +VY+LPK
Sbjct:  347 KWTNIKEQVDMIEMPNGNR-LILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELWTRADA--YDNEVYILPK 418          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_BRUSU (Adenosylhomocysteinase OS=Brucella suis GN=ahcY PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.317e-15
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = -1
Query:    2 VKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 229
            +K   +KPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+    T  Y+ +VYVLPK
Sbjct:  350 LKWTNVKPQVDLIEFPD-GKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNEVYVLPK 422          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_BRUSI (Adenosylhomocysteinase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=ahcY PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.317e-15
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = -1
Query:    2 VKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 229
            +K   +KPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+    T  Y+ +VYVLPK
Sbjct:  350 LKWTNVKPQVDLIEFPD-GKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNEVYVLPK 422          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_BRUO2 (Adenosylhomocysteinase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=ahcY PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.317e-15
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = -1
Query:    2 VKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 229
            +K   +KPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+    T  Y+ +VYVLPK
Sbjct:  350 LKWTNVKPQVDLIEFPD-GKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNEVYVLPK 422          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_BRUME (Adenosylhomocysteinase OS=Brucella melitensis GN=ahcY PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.317e-15
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = -1
Query:    2 VKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 229
            +K   +KPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+    T  Y+ +VYVLPK
Sbjct:  350 LKWTNVKPQVDLIEFPD-GKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNEVYVLPK 422          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_BRUMB (Adenosylhomocysteinase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=ahcY PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.317e-15
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = -1
Query:    2 VKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 229
            +K   +KPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+    T  Y+ +VYVLPK
Sbjct:  350 LKWTNVKPQVDLIEFPD-GKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNEVYVLPK 422          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_BRUC2 (Adenosylhomocysteinase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ahcY PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.317e-15
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = -1
Query:    2 VKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 229
            +K   +KPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+    T  Y+ +VYVLPK
Sbjct:  350 LKWTNVKPQVDLIEFPD-GKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNEVYVLPK 422          
The following BLAST results are available for this feature:
BLAST of CX288511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
SAHH_JANMA7.724e-1660.56Adenosylhomocysteinase OS=Janthinobacterium sp. (s... [more]
SAHH_HERAR7.724e-1660.56Adenosylhomocysteinase OS=Herminiimonas arsenicoxy... [more]
SAHH_BORPD7.724e-1661.97Adenosylhomocysteinase OS=Bordetella petrii (strai... [more]
SAHH_ROSDO1.317e-1557.33Adenosylhomocysteinase OS=Roseobacter denitrifican... [more]
SAHH_BRUSU1.317e-1556.58Adenosylhomocysteinase OS=Brucella suis GN=ahcY PE... [more]
SAHH_BRUSI1.317e-1556.58Adenosylhomocysteinase OS=Brucella suis (strain AT... [more]
SAHH_BRUO21.317e-1556.58Adenosylhomocysteinase OS=Brucella ovis (strain AT... [more]
SAHH_BRUME1.317e-1556.58Adenosylhomocysteinase OS=Brucella melitensis GN=a... [more]
SAHH_BRUMB1.317e-1556.58Adenosylhomocysteinase OS=Brucella melitensis biot... [more]
SAHH_BRUC21.317e-1556.58Adenosylhomocysteinase OS=Brucella canis (strain A... [more]

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Properties
Property NameValue
Genbank descriptionC02001C03SK IF1 Citrus clementina cDNA clone C02001C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288511 ID=CX288511; Name=CX288511; organism=Citrus clementina; type=EST; length=274bp
GCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTGCTCTTCTCC
TTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGAACAGGACAT
CACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGAGACGTCCCT
CAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACCCACCTATCA
GTTTGGGGCTTGATGGTAATGCGCTTAACACCCGGGTAGGTCTCAAGACC
GAGCACATCAAGGGGGGGCCCGGT
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