CX288511

Overview
NameCX288511
Unique NameCX288511
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length274
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:1179..1452. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_XANC8 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.212e-22
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            + V  L    GV++I IKPQ D++VF   N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ +  YEKKVY+LPK
Sbjct:  353 IQVDALNALKGVEKINIKPQVDKYVFGNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDS--YEKKVYILPK 436          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_PLACH (Adenosylhomocysteinase OS=Plasmodium chabaudi GN=PC000295.02.0 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.212e-22
Identity = 51/88 (57.95%), Postives = 65/88 (73.86%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEK-KVYVLPK 262
            + +  L ++ G++   +KPQ DR   P  N  IIVLA+GRL+NL CATGHP+FVMS SF NQV AQLELW+ ++TGKYEK K Y+LPK
Sbjct:  349 IQIADLFSHEGIEIENVKPQVDRVTLPNGNK-IIVLAQGRLLNLACATGHPAFVMSFSFCNQVFAQLELWENRNTGKYEKNKSYILPK 435          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_PLAYO (Adenosylhomocysteinase OS=Plasmodium yoelii yoelii GN=PY02893 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.230e-21
Identity = 51/88 (57.95%), Postives = 64/88 (72.73%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEK-KVYVLPK 262
            + V  L  + G++   +KPQ DR   P  N  IIVLA+GRL+NL CATGHP+FVMS SF NQ+ AQLELW+ ++TGKYEK K Y+LPK
Sbjct:  349 IQVSDLFNHEGIEIENVKPQVDRVTLPNGNK-IIVLAQGRLLNLSCATGHPAFVMSFSFCNQIFAQLELWENRNTGKYEKNKSYILPK 435          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFM (Adenosylhomocysteinase OS=Xylella fastidiosa (strain M12) GN=ahcY PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.607e-21
Identity = 50/87 (57.47%), Postives = 64/87 (73.56%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            + V  L T  GV++I IKPQ D+++ P  N+ + +LAEGRL+NLGCATGHPSFVMS SF NQ +AQ++LW+ K    YEK VY LPK
Sbjct:  353 IQVDALNTLTGVQKINIKPQVDKFILPNGNT-LFLLAEGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWQNKDV--YEKNVYRLPK 436          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIN (Adenosylhomocysteinase OS=Leptospira interrogans GN=ahcY PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.607e-21
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = -1
Query:    2 LETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 247
            L    GV +  IKPQ D++ FP+  S IIVLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPK
Sbjct:  316 LNNEKGVTKKEIKPQVDKYTFPDGKS-IIVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPK 392          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIC (Adenosylhomocysteinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ahcY PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.607e-21
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = -1
Query:    2 LETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 247
            L    GV +  IKPQ D++ FP+  S IIVLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPK
Sbjct:  316 LNNEKGVTKKEIKPQVDKYTFPDGKS-IIVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPK 392          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBL (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ahcY PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.607e-21
Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = -1
Query:    2 LETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 247
            L +  GV +  IKPQ D++ FP+  S I+VLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPK
Sbjct:  316 LNSEKGVTKKEIKPQVDKYTFPDGKS-IVVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPK 392          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBJ (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ahcY PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.607e-21
Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = -1
Query:    2 LETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 247
            L +  GV +  IKPQ D++ FP+  S I+VLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPK
Sbjct:  316 LNSEKGVTKKEIKPQVDKYTFPDGKS-IVVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPK 392          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_NOCFA (Adenosylhomocysteinase OS=Nocardia farcinica GN=ahcY PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.098e-21
Identity = 52/87 (59.77%), Postives = 64/87 (73.56%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            +D+  LE   G  R+TIKPQ D W F E+   IIVL+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+ +VY LPK
Sbjct:  367 IDMAALER-SGATRLTIKPQVDLWTFGESGKSIIVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKPE--EYDNEVYRLPK 450          
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTU (Adenosylhomocysteinase OS=Mycobacterium tuberculosis GN=ahcY PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 4.675e-21
Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = -1
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            +D+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPK
Sbjct:  368 IDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPK 451          
The following BLAST results are available for this feature:
BLAST of CX288511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
SAHH_XANC87.212e-2257.47Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_PLACH7.212e-2257.95Adenosylhomocysteinase OS=Plasmodium chabaudi GN=P... [more]
SAHH_PLAYO1.230e-2157.95Adenosylhomocysteinase OS=Plasmodium yoelii yoelii... [more]
SAHH_XYLFM1.607e-2157.47Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_LEPIN1.607e-2164.63Adenosylhomocysteinase OS=Leptospira interrogans G... [more]
SAHH_LEPIC1.607e-2164.63Adenosylhomocysteinase OS=Leptospira interrogans s... [more]
SAHH_LEPBL1.607e-2163.41Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_LEPBJ1.607e-2163.41Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_NOCFA2.098e-2159.77Adenosylhomocysteinase OS=Nocardia farcinica GN=ah... [more]
SAHH_MYCTU4.675e-2157.47Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]

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Properties
Property NameValue
Genbank descriptionC02001C03SK IF1 Citrus clementina cDNA clone C02001C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288511 ID=CX288511; Name=CX288511; organism=Citrus clementina; type=EST; length=274bp
GCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTGCTCTTCTCC
TTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGAACAGGACAT
CACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGAGACGTCCCT
CAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACCCACCTATCA
GTTTGGGGCTTGATGGTAATGCGCTTAACACCCGGGTAGGTCTCAAGACC
GAGCACATCAAGGGGGGGCCCGGT
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