CX288515

Overview
NameCX288515
Unique NameCX288515
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length567
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288515 vs. ExPASy Swiss-Prot
Match: CD123_AJECN (Cell division cycle protein 123 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=CDC123 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.245e-25
Identity = 67/172 (38.95%), Postives = 95/172 (55.23%), Query Frame = 1
Query:  121 KIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIALLLRSSDSLVHDLCHAYDSCNDKTLTRPPS-----------------------FFLALRKWYPSLRPEMEFRCFVRGQCLVGISQREVTMCYPALSEKKNDIKVLIQELFDSNVRQEFESENYTFDVYV 567
            +IK +IE LGG V PKLNWSAPKDA WIS +  ++C +  +I LLL+SSD + HDL HA+D C   T  +                          + L LRK Y +L P +EFRCFVR + L+ + QR++   +  L   +++++  IQ  FD  +R  F   ++ FDVYV
Sbjct:  106 QIKATIEELGGKVAPKLNWSAPKDATWISATNDMQCRTPNDIYLLLKSSDFVTHDLEHAFDGCVSDTEEKSDGEVEVEVEEGKEKEQKQAEQSRIPYHLVLRK-YITLNPSLEFRCFVRDRKLLCLCQRDLNH-FNFLFGLRDNLRDKIQTFFDIRLRDTFPDPDFVFDVYV 275          
BLAST of CX288515 vs. ExPASy Swiss-Prot
Match: CD123_ASPOR (Cell division cycle protein 123 OS=Aspergillus oryzae GN=cdc123 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.526e-24
Identity = 61/153 (39.87%), Postives = 89/153 (58.17%), Query Frame = 1
Query:  121 KIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIALLLRSSDSLVHDLCHAYDSC----NDKTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGQCLVGISQREVTMCYPALSEKKNDIKVLIQELFDSNVRQEFESENYTFDVYV 567
            +IK +I  LGG + PKLNWSAPKDA W++ +  ++C +  +I LLL+SSD + HDL   +D C     D T T    + L LRK Y +  P +EFRCFVR + L+ I QR+    +  L   +  ++  IQ  FD  ++  F   ++ FDVY+
Sbjct:  108 QIKTTISELGGIITPKLNWSAPKDATWMAATNDMQCRTPNDIYLLLKSSDFISHDLELPFDDCVPDMPDSTTTPDVPYHLVLRK-YVNFNPSLEFRCFVRDRVLLCICQRDQNH-FDFLFPLRETLRSRIQAFFDEKLKDTFPDPSFVFDVYI 258          
BLAST of CX288515 vs. ExPASy Swiss-Prot
Match: CD123_VANPO (Cell division cycle protein 123 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=CDC123 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.603e-24
Identity = 54/140 (38.57%), Postives = 84/140 (60.00%), Query Frame = 1
Query:  151 GAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIALLLRSSDSLVHDLCHAYDSCND-KTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGQCLVGISQREVTMCYPALSEKKNDIKVLIQELFDSNVRQEFESENYTFDVYV 567
            GAV PK+NWSAPKDA WI  + T++C    E+ LLL +S+ + HDL HA+D C D +   +   F L LRKW+  + P +EFR F++   ++GISQR++   Y  L    +  + LI++  D  +   F  +++  D+Y+
Sbjct:  123 GAVAPKMNWSAPKDATWILPNNTMKCNEINEVYLLLNASNYIAHDLQHAFDECEDIEDQKKSSDFELVLRKWF-DINPALEFRIFIKDNEILGISQRDLNY-YDYLEPLVDKFRDLIEDFIDDEILDRFPLKSFVIDLYI 260          
BLAST of CX288515 vs. ExPASy Swiss-Prot
Match: CD123_CANGA (Cell division cycle protein 123 OS=Candida glabrata GN=CDC123 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.441e-24
Identity = 62/150 (41.33%), Postives = 89/150 (59.33%), Query Frame = 1
Query:  121 KIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIALLLRSSDSLVHDLCHAYDSCNDKTL-TRPPSFFLALRKWYPSLRPEMEFRCFVRGQCLVGISQREVTMCYPALSEKKNDIKVLIQELFDSNVRQEFESENYTFDVYV 567
            +IKE I  LG  V PKLNWSAPKDA WI  + T +C    EI LLL +S+ +VHDL HAYD C DK      P + L LR+W+ ++ P +EFR FV+   +  +SQR++   Y  L +  +  K LI E  +  +  +F  +++  D+Y+
Sbjct:  109 QIKEIIVELG-PVTPKLNWSAPKDATWILPNNTTKCNEVNEIYLLLNASNYIVHDLNHAYDECIDKKEGFSTPEYELVLRQWF-AINPALEFRVFVKDGKVAAVSQRDLNY-YDYLDKLTDTFKDLIDEFVEDEMVPQFPDKSFVTDLYI 255          
BLAST of CX288515 vs. ExPASy Swiss-Prot
Match: CD123_YEAST (Cell division cycle protein 123 OS=Saccharomyces cerevisiae GN=CDC123 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.759e-23
Identity = 58/149 (38.93%), Postives = 88/149 (59.06%), Query Frame = 1
Query:  121 KIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIALLLRSSDSLVHDLCHAYDSCNDKTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGQCLVGISQREVTMCYPALSEKKNDIKVLIQELFDSNVRQEFESENYTFDVYV 567
            K+K+++  LG AV PKLNWSAP+DA WI  + T++C    E+ LLL +S+ ++HDL  A+  C D    +   F L LR+W   + P +EFR FV+   +VG +QR++   Y  L E  +  K LI E+    V  +F  +++  DVY+
Sbjct:  110 KLKDALNELG-AVAPKLNWSAPRDATWILPNNTMKCNEVNELYLLLNASNYIMHDLQRAFKGCVDGDDIKGLKFDLVLRQWC-DMNPALEFRVFVKNAHIVGATQRDLNY-YDYLDELSDTFKDLIDEIVHDVVLPKFPDKSFVLDVYI 255          
BLAST of CX288515 vs. ExPASy Swiss-Prot
Match: CD123_YEAS7 (Cell division cycle protein 123 OS=Saccharomyces cerevisiae (strain YJM789) GN=CDC123 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.759e-23
Identity = 58/149 (38.93%), Postives = 88/149 (59.06%), Query Frame = 1
Query:  121 KIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIALLLRSSDSLVHDLCHAYDSCNDKTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGQCLVGISQREVTMCYPALSEKKNDIKVLIQELFDSNVRQEFESENYTFDVYV 567
            K+K+++  LG AV PKLNWSAP+DA WI  + T++C    E+ LLL +S+ ++HDL  A+  C D    +   F L LR+W   + P +EFR FV+   +VG +QR++   Y  L E  +  K LI E+    V  +F  +++  DVY+
Sbjct:  110 KLKDALNELG-AVAPKLNWSAPRDATWILPNNTMKCNEVNELYLLLNASNYIMHDLQRAFKGCVDGDDIKGLKFDLVLRQWC-DMNPALEFRVFVKNAHIVGATQRDLNY-YDYLDELSDTFKDLIDEIVHDVVLPKFPDKSFVLDVYI 255          
BLAST of CX288515 vs. ExPASy Swiss-Prot
Match: CD123_KLULA (Cell division cycle protein 123 OS=Kluyveromyces lactis GN=CDC123 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.156e-22
Identity = 61/151 (40.40%), Postives = 89/151 (58.94%), Query Frame = 1
Query:  127 KESIESLG--GAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIALLLRSSDSLVHDLCHAYDSCNDKTLTRPPS--FFLALRKWYPSLRPEMEFRCFVRGQCLVGISQREVTMCYPALSEKKNDIKVLIQELFDSNVRQEFESENYTFDVYV 567
            +E  E +G  GAV PKLNWSAP+DA WI  + T +C +  +I LLL +S+ + +DL HA+D C D+  +   S  F L LRKW+  + P +EFR FVR   + GISQR++   Y  L   ++    LI+E     V   F+ +++  DVY+
Sbjct:  118 REIAEVIGEYGAVTPKLNWSAPRDATWILPNNTSKCMNVNDIYLLLNASNYIAYDLDHAFDECEDRDNSDNQSIQFELVLRKWF-DINPALEFRVFVRDSEIWGISQRDLNY-YNYLEPLQDTFTNLIEEFVYDIVLPNFDLKSFVLDVYL 266          
BLAST of CX288515 vs. ExPASy Swiss-Prot
Match: CD123_YARLI (Cell division cycle protein 123 OS=Yarrowia lipolytica GN=CDC123 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.337e-20
Identity = 56/141 (39.72%), Postives = 84/141 (59.57%), Query Frame = 1
Query:  151 GAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIALLLRSSDSLVHDLCHAYDSCNDKT--LTRPPSFFLALRKWYPSLRPEMEFRCFVRGQCLVGISQREVTMCYPALSEKKNDIKVLIQELFDSNVRQEFESENYTFDVYV 567
            GAV PKLNWS+P+DA WIS S + RC +  ++ LLL+SSD + HDL     +  DK   + +  SF L LRKW  ++ P +EFRCFV+ + L+ ++QR+    Y  L + K      I+  F  +++  F   ++ FDVY+
Sbjct:  113 GAVAPKLNWSSPQDAIWISPSNSTRCVTVNDVYLLLKSSDYIAHDL-----TMLDKLGGIPKDFSFELVLRKWI-NINPALEFRCFVKDRELIAVTQRDQNY-YEFLIKLKERFLGEIELFFYEHIKDTFPDSSFVFDVYI 246          
BLAST of CX288515 vs. ExPASy Swiss-Prot
Match: CD123_CANAL (Cell division cycle protein 123 OS=Candida albicans GN=CDC123 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.337e-20
Identity = 58/154 (37.66%), Postives = 85/154 (55.19%), Query Frame = 1
Query:  121 KIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIALLLRSSDSLVHDLCHAYDSC-NDKTLTRPPSFFLALRKWYPSLRPEMEFRCFVRGQCLVGISQREVTMCYPALSEKKNDIKVLIQELFDSNVRQEFESE----NYTFDVYV 567
            KI  SI+ +GGAVF KLNWS+PKDA WI    T++C +  ++ LLL SSD +  DL + +      KT+     + L L KW   + P  EFR FV+   ++GISQR+    Y  L   K+++   I +  + +V  + +S+     Y  DVYV
Sbjct:  169 KIDASIQEMGGAVFTKLNWSSPKDAKWIMPGNTIKCQNVSDVYLLLNSSDHIGDDLDNPFSEVQKKKTIPEKVDYELVLTKW-QEINPAYEFRVFVKDHRIIGISQRDNNK-YEFLQGLKSELNEKITQFVEDHVIPKLKSDTQLSKYIVDVYV 320          
BLAST of CX288515 vs. ExPASy Swiss-Prot
Match: CD123_LODEL (Cell division cycle protein 123 OS=Lodderomyces elongisporus GN=CDC123 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.360e-17
Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 1
Query:  121 KIKESIESLGGAVFPKLNWSAPKDAAWISTSGTLRCTSFCEIALLLRSSDSLVHDLCHAYDSCN----DKTLTR-----PPSFFLALRKWYPSLRPEMEFRCFVRGQCLVGISQREVTMCYPALSEKKNDIKVLIQELFDSNVRQEFESE-----NYTFDVYV 567
            +I +SI  LGG V PKLNWS+PKDA+W+     ++CT   ++ LLL+SSD ++ DL + +   +    D+T           + L L++W   L P +EFR FV+   ++GISQR++   Y  L E +  +K  IQ      V  +  +       +  DVYV
Sbjct:  120 EITQSIAELGGKVIPKLNWSSPKDASWLMPGNVIKCTEVDDVLLLLKSSDHVIDDLAYPFLEVSQLPEDETRKNGQDRIKVDYELVLKQW-RDLNPALEFRVFVKEGKILGISQRDLNH-YDFLKELEPQLKENIQLFVTDKVVNKLNASLPNLTKFIVDVYV 280          
The following BLAST results are available for this feature:
BLAST of CX288515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
CD123_AJECN5.245e-2538.95Cell division cycle protein 123 OS=Ajellomyces cap... [more]
CD123_ASPOR1.526e-2439.87Cell division cycle protein 123 OS=Aspergillus ory... [more]
CD123_VANPO2.603e-2438.57Cell division cycle protein 123 OS=Vanderwaltozyma... [more]
CD123_CANGA4.441e-2441.33Cell division cycle protein 123 OS=Candida glabrat... [more]
CD123_YEAST3.759e-2338.93Cell division cycle protein 123 OS=Saccharomyces c... [more]
CD123_YEAS73.759e-2338.93Cell division cycle protein 123 OS=Saccharomyces c... [more]
CD123_KLULA4.156e-2240.40Cell division cycle protein 123 OS=Kluyveromyces l... [more]
CD123_YARLI1.337e-2039.72Cell division cycle protein 123 OS=Yarrowia lipoly... [more]
CD123_CANAL1.337e-2037.66Cell division cycle protein 123 OS=Candida albican... [more]
CD123_LODEL2.360e-1734.36Cell division cycle protein 123 OS=Lodderomyces el... [more]

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Properties
Property NameValue
Genbank descriptionC02001C08SK IF1 Citrus clementina cDNA clone C02001C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288515 ID=CX288515; Name=CX288515; organism=Citrus clementina; type=EST; length=567bp
GATGACGCGCTGCCGAATAGAATCCACAATGCTTTTGAAGAAGAGGACTA
TCAGGTCTCTGAAGGATCTGGAGATGAAGCAGAACCTTCATCTCCTCCAT
CTTTTCCAGAACTAGAATTAAAGATCAAGGAATCTATTGAATCCCTTGGG
GGTGCAGTTTTCCCTAAGCTGAATTGGAGTGCACCAAAAGATGCCGCTTG
GATCAGCACTTCTGGGACCCTTCGATGCACTTCATTCTGTGAGATTGCAC
TCTTACTACGGTCATCTGATTCCTTGGTTCATGATTTGTGTCATGCATAT
GATTCATGCAATGATAAGACCTTGACAAGACCACCAAGTTTCTTCCTCGC
CCTCCGCAAGTGGTATCCATCCTTACGACCAGAGATGGAGTTCCGATGTT
TCGTACGTGGTCAGTGCCTAGTTGGAATTTCCCAGCGAGAGGTCACGATG
TGTTATCCTGCTCTATCTGAGAAGAAAAATGATATTAAAGTGTTGATCCA
AGAACTTTTTGACAGCAATGTGAGACAAGAATTTGAGTCAGAAAATTACA
CATTTGATGTTTATGTC
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