CX288516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288516 vs. ExPASy Swiss-Prot
Match: RL3_MOUSE (60S ribosomal protein L3 OS=Mus musculus GN=Rpl3 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 2.004e-24 Identity = 53/87 (60.92%), Postives = 68/87 (78.16%), Query Frame = 3 Query: 3 ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKIGHGRFQTTQEKQKYYGRMKA*LYAKK 263 I P+GGF HYG V +D++M+KGC VG KKRV+TLR+SLL QT R ALE+I +KFIDT+SK GHGRFQT +EK+ + G +K AK+ Sbjct: 314 INPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKDRIAKE 400
BLAST of CX288516 vs. ExPASy Swiss-Prot
Match: RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 2.004e-24 Identity = 53/87 (60.92%), Postives = 68/87 (78.16%), Query Frame = 3 Query: 3 ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKIGHGRFQTTQEKQKYYGRMKA*LYAKK 263 I P+GGF HYG V +D++M+KGC VG KKRV+TLR+SLL QT R ALE+I +KFIDT+SK GHGRFQT +EK+ + G +K AK+ Sbjct: 314 INPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLKKDRIAKE 400
BLAST of CX288516 vs. ExPASy Swiss-Prot
Match: RL3_MACFA (60S ribosomal protein L3 OS=Macaca fascicularis GN=RPL3 PE=2 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 2.618e-24 Identity = 53/87 (60.92%), Postives = 68/87 (78.16%), Query Frame = 3 Query: 3 ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKIGHGRFQTTQEKQKYYGRMKA*LYAKK 263 I P+GGF HYG V +D++M+KGC VG KKRV+TLR+SLL QT R ALE+I +KFIDT+SK GHGRFQT +EK+ + G +K AK+ Sbjct: 314 INPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKDRIAKE 400
BLAST of CX288516 vs. ExPASy Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 2.618e-24 Identity = 53/87 (60.92%), Postives = 68/87 (78.16%), Query Frame = 3 Query: 3 ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKIGHGRFQTTQEKQKYYGRMKA*LYAKK 263 I P+GGF HYG V +D++M+KGC VG KKRV+TLR+SLL QT R ALE+I +KFIDT+SK GHGRFQT +EK+ + G +K AK+ Sbjct: 314 INPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKKDRIAKE 400
BLAST of CX288516 vs. ExPASy Swiss-Prot
Match: RL3_ENCCU (60S ribosomal protein L3 OS=Encephalitozoon cuniculi GN=RPL3-1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.419e-24 Identity = 54/86 (62.79%), Postives = 70/86 (81.40%), Query Frame = 3 Query: 3 ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKIGHGRFQTTQEKQKYYGRMKA*LYAK 260 I+PMGGFPHYG V++D++M+KG VG +KRVVTLR+SLL+Q A EE+ IKF+DTSSKIGHGRFQT+ EK+ +YG KA + A+ Sbjct: 299 ISPMGGFPHYGEVRNDFIMVKGAVVGARKRVVTLRKSLLRQR---AGEELVIKFVDTSSKIGHGRFQTSAEKKAFYGARKADIAAE 381
BLAST of CX288516 vs. ExPASy Swiss-Prot
Match: RL3_DICDI (60S ribosomal protein L3 OS=Dictyostelium discoideum GN=rpl3 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 5.832e-24 Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 3 Query: 3 ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKIGHGRFQTTQEKQKYYGRMKA 245 I PMGGF HYG+VK ++LM+KGC GP+KR +TLR+S+ QT R ALE+I +KFIDTSSK GHG QT ++K KY+G K+ Sbjct: 313 INPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDKTKYFGVKKS 393
BLAST of CX288516 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4) HSP 1 Score: 105.916 bits (263), Expect = 8.421e-23 Identity = 48/80 (60.00%), Postives = 62/80 (77.50%), Query Frame = 3 Query: 3 ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKIGHGRFQTTQEKQKYYGRMK 242 ITPMGGF HYG +K+D++M+KGC G +KR+VTLR+SL TSR ALEE+ +K+IDT+SK G GRFQT EK + G +K Sbjct: 305 ITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFMGTLK 384
BLAST of CX288516 vs. ExPASy Swiss-Prot
Match: RL3_ASPFU (60S ribosomal protein L3 OS=Aspergillus fumigatus GN=rpl3 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 7.129e-22 Identity = 48/80 (60.00%), Postives = 63/80 (78.75%), Query Frame = 3 Query: 3 ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKIGHGRFQTTQEKQKYYGRMK 242 ITPMGGF YG VK+DY+M+KG G KKRV+TLR++L QTSR A E++++K+IDTSSK GHG FQT +EK+ + G +K Sbjct: 306 ITPMGGFVRYGEVKNDYIMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVELKWIDTSSKFGHGAFQTPEEKRAFMGTLK 385
BLAST of CX288516 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.588e-21 Identity = 48/80 (60.00%), Postives = 60/80 (75.00%), Query Frame = 3 Query: 3 ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKIGHGRFQTTQEKQKYYGRMK 242 ITPMGGF HYG V +D++M+KG G +KRVVTLR+SL TSR ALEE+ +K+IDT+SK G GRFQT EK + G +K Sbjct: 306 ITPMGGFVHYGAVNNDFVMVKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNLKWIDTASKFGKGRFQTPAEKHAFMGTLK 385
BLAST of CX288516 vs. ExPASy Swiss-Prot
Match: RL3B_SCHPO (60S ribosomal protein L3-B OS=Schizosaccharomyces pombe GN=rpl3b PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 2.709e-21 Identity = 46/80 (57.50%), Postives = 62/80 (77.50%), Query Frame = 3 Query: 3 ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKIGHGRFQTTQEKQKYYGRMK 242 ITPMGGF YG+V++D++M+ G GP KRV+TLR+SLL TSR ALE + +K+IDT+SK GHGRFQT E +++ G +K Sbjct: 305 ITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLGTLK 384 The following BLAST results are available for this feature:
BLAST of CX288516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288516 ID=CX288516; Name=CX288516; organism=Citrus clementina; type=EST; length=463bpback to top |