CX288516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288516 vs. ExPASy Swiss-Prot
Match: RL3A_SCHPO (60S ribosomal protein L3-A OS=Schizosaccharomyces pombe GN=rpl3a PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 2.709e-21 Identity = 46/80 (57.50%), Postives = 62/80 (77.50%), Query Frame = 3 Query: 3 ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKIGHGRFQTTQEKQKYYGRMK 242 ITPMGGF YG+V++D++M+ G GP KRV+TLR+SLL TSR ALE + +K+IDT+SK GHGRFQT E +++ G +K Sbjct: 305 ITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLGTLK 384
BLAST of CX288516 vs. ExPASy Swiss-Prot
Match: RL3_CANGA (60S ribosomal protein L3 OS=Candida glabrata GN=RPL3 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 7.882e-21 Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 3 Query: 3 ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKIGHGRFQTTQEKQKYYGRMK 242 I PMGGF HYG+V +D++M+KG G KKRVVTLR+SL TSR A+EE+ +K+IDT+SK G GRFQT EK + G +K Sbjct: 305 INPMGGFVHYGMVNNDFVMVKGSIPGCKKRVVTLRKSLYTNTSRKAVEEVTLKWIDTASKFGKGRFQTPAEKHAFMGTLK 384
BLAST of CX288516 vs. ExPASy Swiss-Prot
Match: RL3_KLULA (60S ribosomal protein L3 OS=Kluyveromyces lactis GN=RPL3 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.029e-20 Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = 3 Query: 3 ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKIGHGRFQTTQEKQKYYGRMK 242 ITPMGGF HYG + +D++++KG G +KRVVTLR+SL TSR ALEE+ +K+IDT+SK G GRFQT EK + G +K Sbjct: 305 ITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384
BLAST of CX288516 vs. ExPASy Swiss-Prot
Match: RL3_NEUCR (60S ribosomal protein L3 OS=Neurospora crassa GN=rpl-3 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.995e-20 Identity = 46/85 (54.12%), Postives = 64/85 (75.29%), Query Frame = 3 Query: 3 ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKIGHGRFQTTQEKQKYYGRMKA*LYA 257 ITPMGGF YG + +D++M+KG G KKRV+TLR+S+ TSR ALE++++K+IDTSS+ GHG FQT EK+++ G +K L A Sbjct: 306 ITPMGGFVRYGEINNDFVMVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVELKWIDTSSEFGHGAFQTPAEKKQFQGTLKKDLAA 390
BLAST of CX288516 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.258e-18 Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 3 Query: 3 ITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKIGHGRFQTTQEKQKYYGRMK 242 I PMGGF YG VK+D++++KG G KKR+VT+R+SL TSR A E + +K+IDT+SK G GRFQT EK + G +K Sbjct: 305 INPMGGFVRYGNVKNDFMLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384 The following BLAST results are available for this feature:
BLAST of CX288516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288516 ID=CX288516; Name=CX288516; organism=Citrus clementina; type=EST; length=463bpback to top |