CX288518
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH_RICCN (Cell division protease ftsH homolog OS=Rickettsia conorii GN=ftsH PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 7.776e-27 Identity = 63/168 (37.50%), Postives = 102/168 (60.71%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGM-EGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMR 498 NL+NEAA++A R GK + +++++ D+++ G+ ++ K K L AYHE GHA+ G P P+ K T++PRG A G+ +P D +++Q+ + I + GR AEE+IFG +VT+GA+ D++ T +A+ MVT G+S+ IGP + GS D+ R Sbjct: 366 NLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVARRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLSDLIGP--IFHGSSGDDMYGR 531
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH4_ORYSJ (Cell division protease ftsH homolog 4, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.955e-26 Identity = 64/150 (42.67%), Postives = 94/150 (62.67%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE 444 NL+N AA+ A G A++ +++ + DRI+ G E V++D +S+ L AYHE GHA+ T G PV K T+VPRG+ G+ +P D T S++Q+ A + + GR AEE+IFG EVT+GA+ D Q T +A+ MVT +GMS+ Sbjct: 431 NLVNVAALKAAMDGAKAVTMNDLEYAKDRIMMGSERKSAVISD-ESRKLTAYHEGGHALVAIHTEGARPVHKATIVPRGRTLGMVSQLPEKDETSFSRKQMLAWLDVSMAGRVAEELIFGDSEVTSGASSDFQNATKMARAMVTKYGMSK 579
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH9_ORYSJ (Cell division protease ftsH homolog 9, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH9 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 5.041e-26 Identity = 73/168 (43.45%), Postives = 96/168 (57.14%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGTVM--TDGKSKS--------------LVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGP 453 NL+N AAI A G +++ +++ + DRI+ G E M +D K+ L AYHE GHAI T G P+ K T++PRG A G+ +PS D T ISK+QL AR+ +GGR AEE+IFG VTTGA DL T LA+ MV+ GMS+ IGP Sbjct: 535 NLVNIAAIKAAVEGADKLAAAQLEFAKDRIIMGTERKSMFISDESKKACLFKLLYFILRELILTAYHESGHAIVALNTQGAHPIHKATILPRGSALGMVTQLPSQDETSISKKQLLARLDVCMGGRVAEELIFGEDNVTTGARNDLHTATELAQYMVSNCGMSDAIGP 702
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTU (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis GN=ftsH PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.583e-26 Identity = 61/165 (36.97%), Postives = 105/165 (63.64%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAG--MEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGM-SEIGPWSLMDGSQSGD 486 N++NEAA+L R I+ +++++DR++ G +G ++++ + K + AYHE GH + P +P+ KVT++ RG+ G +P +D L ++ ++ A++V +GGRAAEE++F P TTGA D++Q T +A+ MVT FGM S++G ++ GS+ GD Sbjct: 374 NVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISE-QEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREP--TTGAVSDIEQATKIARSMVTEFGMSSKLG--AVKYGSEHGD 533
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTA (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.583e-26 Identity = 61/165 (36.97%), Postives = 105/165 (63.64%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAG--MEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGM-SEIGPWSLMDGSQSGD 486 N++NEAA+L R I+ +++++DR++ G +G ++++ + K + AYHE GH + P +P+ KVT++ RG+ G +P +D L ++ ++ A++V +GGRAAEE++F P TTGA D++Q T +A+ MVT FGM S++G ++ GS+ GD Sbjct: 374 NVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISE-QEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREP--TTGAVSDIEQATKIARSMVTEFGMSSKLG--AVKYGSEHGD 533
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH_MYCBO (Cell division protease ftsH homolog OS=Mycobacterium bovis GN=ftsH PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.583e-26 Identity = 61/165 (36.97%), Postives = 105/165 (63.64%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAG--MEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGM-SEIGPWSLMDGSQSGD 486 N++NEAA+L R I+ +++++DR++ G +G ++++ + K + AYHE GH + P +P+ KVT++ RG+ G +P +D L ++ ++ A++V +GGRAAEE++F P TTGA D++Q T +A+ MVT FGM S++G ++ GS+ GD Sbjct: 374 NVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISE-QEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREP--TTGAVSDIEQATKIARSMVTEFGMSSKLG--AVKYGSEHGD 533
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: YME1_YEAST (Protein YME1 OS=Saccharomyces cerevisiae GN=YME1 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 8.598e-26 Identity = 66/176 (37.50%), Postives = 106/176 (60.23%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGT--VMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMS-EIGPWSLMDGSQSGDVIMRMMARNSM 519 NL+N+AA+ A ++ ++ + + D+I+ G E V+TD K+ A+HE GHAI T G P+ K T++PRG+A G+T+ +P D I+K++ AR+ +GG+ AEE+I+G T+G DLQ TG A+ MVT +GMS ++GP +L + +S +R +A N + Sbjct: 489 NLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAERKTMVLTDAARKA-TAFHEAGHAIMAKYTNGATPLYKATILPRGRALGITFQLPEMDKVDITKRECQARLDVCMGGKIAEELIYGKDNTTSGCGSDLQSATGTARAMVTQYGMSDDVGPVNLSENWESWSNKIRDIADNEV 663
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.267e-25 Identity = 62/157 (39.49%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGM-SEIGPWSLMD 468 NL+N+AAI A R + + D+ DR++ G D ++ + A+HE GHA+ LT P+ KVT++PRG+A GLT F+ D + +++ QL A++ +GGR EE++FG +VT GAA D ++ T LA+ MV FG S+IGP + D Sbjct: 375 NLVNQAAIAAALRNDPFVEMHHLWDARDRLIMGPAKRRPLDDQTNRVSAFHEAGHALVALLTADSIPLHKVTIIPRGEAGGLTSFLQEKDISFMTRAQLLAQLDVLMGGRVGEELVFGADKVTNGAADDFRKATILAQNMVKRFGFSSKIGPRVIPD 531
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH_MYCLE (Cell division protease ftsH homolog OS=Mycobacterium leprae GN=ftsH PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.267e-25 Identity = 60/165 (36.36%), Postives = 105/165 (63.64%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAG--MEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGM-SEIGPWSLMDGSQSGD 486 N++NEAA+L R I+ +++++DR++ G +G ++++ + K + AYHE GH + P +P+ KVT++ RG+ G +P +D L ++ ++ A++V +GGRAAEE++F P TTGA D+++ T +A+ MVT FGM S++G ++ GS+ GD Sbjct: 374 NVVNEAALLTARENGLVITGPALEEAVDRVIGGPRRKGRIISE-QEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREP--TTGAVSDIEKATKIARSMVTEFGMSSKLG--AVRYGSEHGD 533
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.267e-25 Identity = 62/166 (37.35%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIM 495 N+ NEAA++A R AI+ K + +I+R++ G+E T + + K VAYHE GHA+ G DP+ KV+++PRG+ G ++P + L +K+QL R+ LGGR +EE+ FG +TTGA DL+++T A + FGM+E D + GD+++ Sbjct: 522 NVCNEAALIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQ-YLYTKEQLLDRMCMTLGGRVSEEIFFG--RITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVL 684 The following BLAST results are available for this feature:
BLAST of CX288518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288518 ID=CX288518; Name=CX288518; organism=Citrus clementina; type=EST; length=521bpback to top |