CX288518
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.267e-25 Identity = 62/151 (41.06%), Postives = 95/151 (62.91%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEI 447 N++NEAA+LAGR + + + + ++++R +AG+E + K K +VAYHE GHA+ +T G V KV+++PRG A G T P ++ L+ K +L A I LGGRAAEEV E++TGA+ DL++ T + K MV+ +GMS + Sbjct: 383 NIINEAALLAGRNNQKEVKQQHLKEAVERGIAGLEKKSRRISPKEKKIVAYHESGHAVISEMTKGSTRVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEEVFL--EEISTGASNDLERATDIIKGMVSYYGMSSV 531
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: RCA1_YEAST (Mitochondrial respiratory chain complexes assembly protein RCA1 OS=Saccharomyces cerevisiae GN=RCA1 PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 5.573e-25 Identity = 62/154 (40.26%), Postives = 97/154 (62.99%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQ-ARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPW 456 N+ NEAA++A R + A+ + +I+R++ G+E + + + K +VAYHE GHA+CG DP+ KV+++PRGQ A G ++P D L+++QQL R+ LGGR +EE+ F P VT+GA+ D +++T +A MVT GMS+ W Sbjct: 562 NVCNEAALIAARSDEDAVKLNHFEQAIERVIGGVERKSKLLSPEEKKVVAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPG-DIFLLTEQQLKDRMTMSLGGRVSEELHF--PSVTSGASDDFKKVTSMATAMVTELGMSDKIGW 712
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 7.279e-25 Identity = 61/151 (40.40%), Postives = 96/151 (63.58%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEI 447 N++NEAA+LAGR + + + + ++++R +AG+E + K K +VAYHE GHA+ +T G V KV+++PRG A G T P ++ L+ K +L A I LGGRAAE+V E++TGA+ DL++ T + K MV+ +GMS++ Sbjct: 389 NIINEAALLAGRNNQKEVKQQHLKEAVERGIAGLEKKSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEDVFL--QEISTGASNDLERATDIIKGMVSYYGMSDV 537
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 7.279e-25 Identity = 61/166 (36.75%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIM 495 N+ NEAA++A R +I+ K + +I+R++ G+E T + + K VAYHE GHA+ G DP+ KV+++PRG+ G ++P + L +K+QL R+ LGGR +EE+ FG +TTGA DL+++T A + FGM+E D + GD+++ Sbjct: 523 NVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQ-YLYTKEQLLDRMCMTLGGRVSEEIFFG--RITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVL 685
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: YME1_CAEEL (Protein YME1 homolog OS=Caenorhabditis elegans GN=ymel-1 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 9.506e-25 Identity = 60/150 (40.00%), Postives = 89/150 (59.33%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAG--MEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE 444 N++N+AA+ A ++ +D++ DR++ G G + D ++ AYHE GH + T P+ KVT++PRGQ+ G T +P D ++K Q+ A + +GGR AEE+IFG +VTTGAA DL + T LA QMV FGMS+ Sbjct: 410 NMVNQAALKAATDNAVEVTMAYLDEARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTLVSLYTKDATPLHKVTIIPRGQSLGHTAMLPEKDSYQLTKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDLSKATQLAVQMVKVFGMSD 559
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 1.621e-24 Identity = 61/151 (40.40%), Postives = 95/151 (62.91%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEI 447 N++NEAA+LAGR + + + + ++++R +AG+E + K K +VAYHE GHA+ +T G V KV+++PRG A G T P ++ L+ K +L A I LGGRAAE+V E++TGA+ DL++ T + K MV+ +GMS + Sbjct: 383 NIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEKKSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEDVFL--EEISTGASNDLERATDIIKGMVSYYGMSSV 531
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae GN=AFG3 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.118e-24 Identity = 63/149 (42.28%), Postives = 93/149 (62.42%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQ-ARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMS 441 N NEAA++A R I+ + +I+R++AG+E T + + K VAYHE GHA+CG DP+ KV+++PRGQ A G ++P D LIS++Q R++ LGGR +EE+ F P VT+GA D +++T +A MVT+ GMS Sbjct: 507 NACNEAALIAARHNDPYITIHHFEQAIERVIAGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQ-YLISEEQFRHRMIMALGGRVSEELHF--PSVTSGAHDDFKKVTQMANAMVTSLGMS 652
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.118e-24 Identity = 60/166 (36.14%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIM 495 N+ NEAA++A R +I+ K + +I+R++ G+E T + + K VAYHE GHA+ G DP+ KV+++PRG+ G ++P + L +++QL R+ LGGR +EE+ FG +TTGA DL+++T A + FGM+E D + GD+++ Sbjct: 524 NVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPREQ-YLYTREQLLDRMCMTLGGRVSEEIFFG--RITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVL 686
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 3.612e-24 Identity = 57/149 (38.26%), Postives = 92/149 (61.74%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE 444 N+ NEAA++A R ++ + + +I+R++ G+E T + K+ VAYHE GHA+ G DP+ KV+++PRG+ G ++P + L +++QLF R+ LGGR AE++ FG ++TTGA DL+++T A + FGMSE Sbjct: 515 NVCNEAALIAARHLSPSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLGYAQYLPREQ-FLYTREQLFDRMCMMLGGRVAEQLFFG--QITTGAQDDLRKVTQSAYAQIVQFGMSE 660
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH9_ARATH (Cell division protease ftsH homolog 9, chloroplastic OS=Arabidopsis thaliana GN=FTSH9 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 4.718e-24 Identity = 68/169 (40.24%), Postives = 105/169 (62.13%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGME-GTVMTDGKSKSLVAYHEVGHAICGT----LTPGHDPVQKVTLVPR-GQARGLTWFIPS-DDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSG 483 NL+NEAA+LAGR+ K + + +++R +AG+E T G K++VA HE GHA+ GT L G V+K++++PR G A G T+ P+ +D L+ +L R+V LGGRAAEEV++ G ++TGA D+++ T +A + V +G++E IGP S+ S G Sbjct: 543 NLVNEAALLAGRKSKMTVDKIDFIHAVERSIAGIEKKTARLKGSEKAVVARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSGGALGFTYIPPTHEDRYLLFIDELHGRLVTLLGGRAAEEVVYSG-RISTGALDDIRRATDMAYKAVAEYGLNEKIGPVSVATLSAGG 710 The following BLAST results are available for this feature:
BLAST of CX288518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288518 ID=CX288518; Name=CX288518; organism=Citrus clementina; type=EST; length=521bpback to top |