CX288518
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: SPG7_HUMAN (Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20 Identity = 59/162 (36.42%), Postives = 96/162 (59.26%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGM-EGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPR-GQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQ 477 N+ NEAA+ A R G ++ + + +++R++AG + + + + + +VA+HE GHA+ G + + V KV++ PR A G +P D L +K+QLF R+ LGGRA+E + F EVT+GA DL+++T +A MV FGM+ IGP S + + Sbjct: 523 NICNEAALHAAREGHTSVHTLNFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQ-HLFTKEQLFERMCMALGGRASEALSFN--EVTSGAQDDLRKVTRIAYSMVKQFGMAPGIGPISFPEAQE 681
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: SPG7_RAT (Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.228e-15 Identity = 52/136 (38.24%), Postives = 76/136 (55.88%), Query Frame = 1 Query: 88 IVAGMEGTV----MTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPR-GQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMS-EIGPWSLMDGSQ 477 + G GT + + + +VA+HE GHA+ G L + V KV++ PR A G + +P D L +K+QLF R+ LGGRAAE + F VT+GA DL+++T +A MV FGM+ IGP S + + Sbjct: 512 LTPGFSGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQ-YLFTKEQLFERMCMALGGRAAEAISFS--RVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQE 644
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSHC_ARATH (Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 4.893e-13 Identity = 51/164 (31.10%), Postives = 86/164 (52.44%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDG-----------KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPT---LISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIG 450 NL+NEAAI++ R+G++ I ++I D +D+ + G ++T+ + K L+A HE GH + L P D L+P G+ ++ F P +D + + ++V GGR AE V+F G VT G DL++IT +A++MV + + +G Sbjct: 708 NLVNEAAIMSVRKGRSYIYQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSYEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAVSVFYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVF-GDNVTDGGKDDLEKITKIAREMVISPQSARLG 870 The following BLAST results are available for this feature:
BLAST of CX288518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288518 ID=CX288518; Name=CX288518; organism=Citrus clementina; type=EST; length=521bpback to top |