CX288522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288522 vs. ExPASy Swiss-Prot
Match: IMP4_YARLI (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Yarrowia lipolytica GN=IMP4 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.847e-23 Identity = 61/174 (35.06%), Postives = 96/174 (55.17%), Query Frame = 3 Query: 9 NDADEFSSILKQGCAPKILITTCRFNSSRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 530 ++ D+ S + PK+++TT R S+R F E+ + P S RG L ++ K + +IV+H +R P A+ + P GPTA+F L +VLR D+ + GN + P L+ +NF T LG RV ++++ LFP + RV+TF N+ DFI R H Y+ +T+E Sbjct: 64 DEIDDEYSAMSGITDPKVVVTTSRDPSTRLSQFAKEVKLLFPTSIRLNRGGTVLPSLVSACKTSASSDLIVLHEHRGVPTAMTVSHFPHGPTAYFSLHNVVLRHDLPDTGNMSEVHPHLIFDNFTTDLGKRVVQILKHLFPPGVKKDSARVITFANRGDFISVRQHVYV-KTRE 236
BLAST of CX288522 vs. ExPASy Swiss-Prot
Match: IMP4_DEBHA (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Debaryomyces hansenii GN=IMP4 PE=3 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 6.331e-23 Identity = 62/172 (36.05%), Postives = 94/172 (54.65%), Query Frame = 3 Query: 18 DEFSSILKQGCAPKILITTCRFNSSRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKES 533 DE+S+ L PK+LITT R S + F E+ + PNS RG Y + ++ ++ + +I++H +R P +L I P GP+ F L + LR D+ GN + P LV NF + LG RV ++++ LFP + RV+TF N DFI RHH Y+ +TK++ Sbjct: 68 DEYSA-LSGISEPKVLITTSRNPSVKLLQFSKEIKLMFPNSIKLNRGNYVITDLVATCQRVQISDLIILHEHRGIPTSLTISHFPHGPSIIFTLHNVKLRHDLPEIGNSSESYPHLVFENFTSELGKRVVKIMKHLFPPGVKKDSSRVITFINNDDFISVRHHMYV-KTKDT 237 The following BLAST results are available for this feature:
BLAST of CX288522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288522 ID=CX288522; Name=CX288522; organism=Citrus clementina; type=EST; length=566bpback to top |