CX288532
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288532 vs. ExPASy Swiss-Prot
Match: ARNA_SHIF8 (Bifunctional polymyxin resistance protein arnA OS=Shigella flexneri serotype 5b (strain 8401) GN=arnA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.871e-30 Identity = 71/188 (37.77%), Postives = 107/188 (56.91%), Query Frame = 2 Query: 41 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK---------VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDM 574 ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ PFNW+GPR+D ++ G R + NL+ P+KL+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K +G +E S +YG+GY D + R P + Sbjct: 446 EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFLPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVE-------SSCYYGKGYQDVEHRKPSI 623
BLAST of CX288532 vs. ExPASy Swiss-Prot
Match: ARNA_SHIFL (Bifunctional polymyxin resistance protein arnA OS=Shigella flexneri GN=arnA PE=3 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 7.668e-30 Identity = 71/188 (37.77%), Postives = 107/188 (56.91%), Query Frame = 2 Query: 41 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK---------VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDM 574 ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ PFNW+GPR+D ++ G R + NL+ P+KL+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K +G +E S +YG+GY D + R P + Sbjct: 446 EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFLPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYHIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVE-------SSCYYGKGYQDVEHRKPSI 623
BLAST of CX288532 vs. ExPASy Swiss-Prot
Match: ARNA_PSEA7 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa (strain PA7) GN=arnA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.668e-30 Identity = 76/194 (39.18%), Postives = 110/194 (56.70%), Query Frame = 2 Query: 14 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDM 574 QDP + ED S + G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + +L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQL E + + A+ A E V S+ FYG+GY D R P + Sbjct: 442 QDPDF---DEDRSNLVVGPINKQRWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLESARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQLGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSI 624
BLAST of CX288532 vs. ExPASy Swiss-Prot
Match: ARNA_SALG2 (Bifunctional polymyxin resistance protein arnA OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=arnA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.308e-29 Identity = 70/182 (38.46%), Postives = 106/182 (58.24%), Query Frame = 2 Query: 41 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDM 574 ED S I G + K RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + +L+ P+KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K P V S+ +YG+GY D R P + Sbjct: 446 EDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILSLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSI 623
BLAST of CX288532 vs. ExPASy Swiss-Prot
Match: ARNA_WIGBR (Bifunctional polymyxin resistance protein arnA OS=Wigglesworthia glossinidia brevipalpis GN=arnA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.208e-28 Identity = 72/190 (37.89%), Postives = 106/190 (55.79%), Query Frame = 2 Query: 41 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEV---------YAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 580 E+ S + G+I+ QRW Y+ +KQL++R+I+A G +N L FTI RPFNWIGP +D + + RV NL+ P+ +V+ G +R F I D IEA+ +I+N + N I N+GNPHNE T+ QL +++ + + K SG L S +YGEGY D D+R P++ I Sbjct: 445 EENSNLVTGAIKNQRWIYSSSKQLLDRIIWAYGVKNNLNFTIFRPFNWIGPGLDDFKIAEKQN---ARVTTQIIFNLINGLPVTIVNNGNQKRCFTDIDDGIEALFEIIKNKNNKCNKKIINIGNPHNEYTIMQLTKIIINIIYSNNRNYNFPKFSGFNML-------SGTNYYGEGYQDIDRRKPNIDI 624 The following BLAST results are available for this feature:
BLAST of CX288532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288532 ID=CX288532; Name=CX288532; organism=Citrus clementina; type=EST; length=592bpback to top |