CX288539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.481e-63 Identity = 110/201 (54.73%), Postives = 144/201 (71.64%), Query Frame = 1 Query: 7 SKRVLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAYKNWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLRHE 609 + +V TP+ + +WQ+AKA+V ND GVHQL++HWL THA IEPF++A +RQLS +HPI+KLL PH R T+ INA ARQ L+NA GV+ES ++ MEMSA YK+W F + LPADL++RG+AV D + PHG++LLIEDYPYA DGL IWSAI+ WV Y S YY + +I D ELQ+W+ E GH D ++E Sbjct: 486 TSKVYTPSDQGVESSIWQLAKAYVAVNDVGVHQLISHWLNTHAVIEPFVIATNRQLSVLHPIHKLLYPHFRDTMNINASARQLLVNAGGVLESTVFQSKFAMEMSAVVYKDWVFPDQALPADLVKRGVAVEDSSSPHGVRLLIEDYPYAVDGLEIWSAIKSWVTDYCSFYYGSDEEILKDNELQAWWKELREVGHGDKKNE 686
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 3.300e-63 Identity = 111/201 (55.22%), Postives = 145/201 (72.14%), Query Frame = 1 Query: 10 KRVLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAY-KNWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLRHE 609 KR T +DAT +WLW++AKAHV ++D G HQLV+HWLRTHAC+EP+I+A +RQLS MHP+Y+LL PH RYT+EINALAR+ LINADG+IE F G+Y +E+S+ AY W+F+ E LP DLI RG+AV L+L I+DYPYA DGLLIW +I+ W YV YY + + D+EL++W+ E GHAD + E Sbjct: 521 KRAFTHGSDATESWLWKLAKAHVLTHDTGYHQLVSHWLRTHACVEPYIIATNRQLSRMHPVYRLLHPHFRYTMEINALAREALINADGIIEEAFLAGKYSIELSSVAYGAAWQFNTEALPEDLINRGLAV--RRDDGELELAIKDYPYADDGLLIWGSIKQWASDYVDFYYKSDGDVAGDEELRAWWEEVRTKGHADKKDE 719
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOXB_PHAVU (Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 4.309e-63 Identity = 106/196 (54.08%), Postives = 143/196 (72.96%), Query Frame = 1 Query: 16 VLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAYKNWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLR 603 V PA + ++W +AKA+V ND+ HQLV+HWL THA +EPF+LA +RQLS +HP+YKLL PH R T+ IN+LAR++L+NADG+IE F GRY +E+SA YK+W + LP DL++RG+AV DP+ PHG+KL+IEDYPYA+DGL IW AI+ WV YV+ YY + + D ELQ+W+ E + GH DL+ Sbjct: 374 VYVPAYEGVEAYIWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFVLATNRQLSVVHPVYKLLFPHYRDTMNINSLARKSLVNADGIIEKTFLWGRYALELSAVIYKDWSLHDQALPNDLVKRGVAVKDPSAPHGVKLVIEDYPYASDGLEIWDAIKSWVVEYVAFYYKSDEVLQQDSELQAWWKELVQVGHGDLK 569
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 4.765e-62 Identity = 110/197 (55.84%), Postives = 144/197 (73.10%), Query Frame = 1 Query: 13 RVLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAYKNWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLR 603 +V PA++ +W +AKA V ND+ HQLV+HWL THA +EPFI+A +R LS +HPI+KLL PH R T+ INALAR L+NA+G+IES F G Y MEMSA YK+W F +GLP DLI+RG+AV DP+ PHG++LLIEDYPYA+DGL IW+AI+ WV YV+ YY + + I D ELQ+++ E + GH DL+ Sbjct: 492 KVYLPASEGVEASIWLLAKAFVVVNDSCYHQLVSHWLNTHAVVEPFIIATNRHLSVVHPIHKLLLPHYRDTMNINALARNVLVNAEGIIESTFLWGNYAMEMSAVVYKDWVFPDQGLPNDLIKRGVAVKDPSSPHGVRLLIEDYPYASDGLEIWAAIKSWVEEYVNFYYKSDAAIAQDAELQAFWKELVEVGHGDLK 688
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOX1_HORVU (Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 236.113 bits (601), Expect = 1.061e-61 Identity = 104/201 (51.74%), Postives = 144/201 (71.64%), Query Frame = 1 Query: 1 ARSKRVLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAYKNWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLR 603 A+SK + + W+W++AKA+V ND+G HQLV+HWL THA +EPF+++ +R LS HP++KLL PH R T+ INALARQ LINA G+ E PG++ + MSA YK+W+F ++GLP DLI+RGMAV DP+ P+ ++LL+ DYPYAADGL IW AIE +V Y++ YYPN + D E+Q+W+ E+ GH DL+ Sbjct: 479 AKSKVYTPVPSGSVEGWVWELAKAYVAVNDSGWHQLVSHWLNTHAVMEPFVISTNRHLSVTHPVHKLLSPHYRDTMTINALARQTLINAGGIFEMTVFPGKFALGMSAVVYKDWKFTEQGLPDDLIKRGMAVEDPSSPYKVRLLVSDYPYAADGLAIWHAIEQYVSEYLAIYYPNDGVLQGDTEVQAWWKETREVGHGDLK 679
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 2.365e-61 Identity = 106/198 (53.54%), Postives = 142/198 (71.72%), Query Frame = 1 Query: 16 VLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAYKNWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLRHE 609 V PA + + +W +AKA+V ND+ HQLV+HWL THA +EPF++A +R LS +HPIYKLL PH R T+ IN+LAR +L+N G+IE F GRY MEMS+ YKNW F ++ LPADLI+RGMA+ DP+ P G+KL++EDYPYA DGL IW+ I+ WV YVS YY + ++ D ELQ+W+ E + GH D ++E Sbjct: 489 VYQPALEGVESSIWLLAKAYVIVNDSCYHQLVSHWLNTHAVVEPFVIATNRHLSCLHPIYKLLYPHYRDTMNINSLARLSLVNDGGIIEKTFLWGRYSMEMSSKVYKNWVFTEQALPADLIKRGMAIEDPSSPCGVKLVVEDYPYAVDGLEIWAIIKTWVQDYVSLYYTSDEKLRQDSELQAWWKELVEVGHGDKKNE 686
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 7.607e-60 Identity = 107/199 (53.77%), Postives = 140/199 (70.35%), Query Frame = 1 Query: 13 RVLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAYKNWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLRHE 609 +V PA + + +W +AKA+V ND+ HQLV+HWL THA +EPFI+A +R LS +HPIYKLL PH R T+ IN LAR +L+N GVIE F GRY +EMSA YK+W F + LPADLI+RGMA+ DP+ PHG++L+IEDYPYA DGL IW AI+ WV YV YY + + +D ELQ+ + E + GH D ++E Sbjct: 484 QVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSLVNDGGVIEQTFLWGRYSVEMSAVVYKDWVFTDQALPADLIKRGMAIEDPSCPHGIRLVIEDYPYAVDGLEIWDAIKTWVHEYVFLYYKSDDTLREDPELQACWKELVEVGHGDKKNE 682
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 9.935e-60 Identity = 109/198 (55.05%), Postives = 142/198 (71.72%), Query Frame = 1 Query: 13 RVLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTL-EINALARQNLINADGVIESCFTPGRYCMEMSAAAYKNWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLR 603 +V+ PA + + +W +AKA+V ND+ HQL++HWL THA IEPF++A +RQLS +HPI KLL PH R T+ INALAR +LINA+G+IE F P +Y +EMS+A YK W F + LP DLI+R MAV D + P+GL+LLIEDYPYA DGL IW+AI+ WV YVS YY + I +D ELQ W+ E + GH DL+ Sbjct: 490 KVILPADEGVESTIWLLAKAYVVVNDSCYHQLMSHWLNTHAVIEPFVIATNRQLSVVHPINKLLAPHYRDTMMNINALARDSLINANGLIERSFLPSKYAVEMSSAVYKYWVFTDQALPNDLIKRNMAVKDSSSPYGLRLLIEDYPYAVDGLEIWTAIKTWVQDYVSLYYATDNDIKNDSELQHWWKEVVEKGHGDLK 687
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 2.891e-59 Identity = 106/199 (53.27%), Postives = 137/199 (68.84%), Query Frame = 1 Query: 13 RVLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAYKNWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLRHE 609 +V TPA +WQ AKA+V ND G+HQL++HWL THA IEPF++A +R LS +HPI+KLL PH R T+ INALAR+ L DG E+ P +Y MEMSAAAYK+W F ++ LPADL++RG+AV D + PHG++LLI DYPYA DGL IW+AI+ WV Y YY + + D ELQ+W+ E GH D + E Sbjct: 487 KVYTPADQGVEGSIWQFAKAYVAVNDMGIHQLISHWLNTHAVIEPFVVATNRHLSVLHPIHKLLHPHFRNTMNINALARETL-TYDGGFETSLFPAKYSMEMSAAAYKDWVFPEQALPADLLKRGVAVEDLSSPHGIRLLILDYPYAVDGLEIWAAIKSWVTEYCKFYYKSDETVEKDTELQAWWKELREEGHGDKKDE 684
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 5.451e-58 Identity = 104/202 (51.49%), Postives = 137/202 (67.82%), Query Frame = 1 Query: 16 VLTPAA------DATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAYKNWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLR 603 V TPAA A W+WQ+AKA+V ND HQL++HWL THA +EPF++A +RQLS HP++KLL PH R T+ INALARQ LIN G+ E P ++ + MS+A YK+W F + LP DL++RG+AVPDP P+ ++LLIEDYPYA DGL +W AIE W Y++ YYPN + D ELQ+W+ E GH D++ Sbjct: 486 VYTPAARGGTGAGAVEWWVWQLAKAYVNVNDYCWHQLISHWLNTHAVMEPFVIATNRQLSVAHPVHKLLLPHYRDTMTINALARQTLINGGGIFEMTVFPRKHALAMSSAFYKDWSFADQALPDDLVKRGVAVPDPASPYKVRLLIEDYPYANDGLAVWHAIEQWATEYLAIYYPNDGVLQGDAELQAWWKEVREVGHGDIK 687 The following BLAST results are available for this feature:
BLAST of CX288539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288539 ID=CX288539; Name=CX288539; organism=Citrus clementina; type=EST; length=611bpback to top |