CX288542

Overview
NameCX288542
Unique NameCX288542
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length587
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288542 vs. ExPASy Swiss-Prot
Match: PEPQ2_IDILO (Xaa-Pro dipeptidase 2 OS=Idiomarina loihiensis GN=pepQ2 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.355e-21
Identity = 54/165 (32.73%), Postives = 87/165 (52.73%), Query Frame = 3
Query:   51 IYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 536
            +  A+ KA   +++ +KPGV + D+H      + + L     + G+   +      + FMPHGLGHF+G+  HD GG+    KG    +      LR +R+++   V T+EPG Y +D LL    E    S   N E +   + +GGVRIE  ++V A+G++N+T
Sbjct:  268 LVEAMDKAQQELLSEIKPGVSYYDLHVSMHLKVAQILSDFEFIKGDAQSIYDKGYTSAFMPHGLGHFIGLQVHDVGGFLKDDKGNSYERSERHPFLRLLRDIEVGHVFTIEPGLYVVDQLL----EEHKDSADINWEKVDELRPYGGVRIEDSIVVGADGNENLT 428          
BLAST of CX288542 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEB9 (Xaa-Pro dipeptidase OS=Shewanella baltica (strain OS195) GN=pepQ PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.300e-21
Identity = 55/165 (33.33%), Postives = 89/165 (53.94%), Query Frame = 3
Query:   51 IYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 536
            +  A+ KA   +I+ M+PGV + D+H      + + L    +  G+V  ++   + + F PHGLGH LG+  HD GG+    +GT  +       LR  R L    V+T+EPG Y ID LL   ++ +S  +  N + +   + FGG+RIE +V+V  + ++NMT
Sbjct:  270 LITAMNKAQLELIDMMRPGVRYPDLHLATHAKVAQMLLDFDLATGDVQGLIDQGITSAFFPHGLGHMLGLQVHDVGGFSHDERGTHIAAPEAHPFLRCTRILAPNQVLTMEPGLYIIDTLL-NELKQDSRGQQINWQTVDELRPFGGIRIEDNVIVHQDRNENMT 433          
BLAST of CX288542 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEB2 (Xaa-Pro dipeptidase OS=Shewanella baltica (strain OS223) GN=pepQ PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.300e-21
Identity = 55/165 (33.33%), Postives = 89/165 (53.94%), Query Frame = 3
Query:   51 IYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 536
            +  A+ KA   +I+ M+PGV + D+H      + + L    +  G+V  ++   + + F PHGLGH LG+  HD GG+    +GT  +       LR  R L    V+T+EPG Y ID LL   ++ +S  +  N + +   + FGG+RIE +V+V  + ++NMT
Sbjct:  270 LITAMNKAQLELIDMMRPGVRYPDLHLATHAKVAQMLLDFDLATGDVQGLVDQGITSAFFPHGLGHMLGLQVHDVGGFSHDERGTHIAAPEAHPFLRCTRILAPNQVLTMEPGLYIIDTLL-NELKQDSRGQQINWQTVDELRPFGGIRIEDNVIVHQDRNENMT 433          
BLAST of CX288542 vs. ExPASy Swiss-Prot
Match: PEPQ_XANAC (Xaa-Pro dipeptidase OS=Xanthomonas axonopodis pv. citri GN=pepQ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.416e-20
Identity = 56/170 (32.94%), Postives = 92/170 (54.12%), Query Frame = 3
Query:   36 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 536
            SD   + +AV  A   +   ++ GV +  +H  A   ++  LK+ G++  + +  +A  + A F PHGLGH +G+  HD  G+    +G    + PG   LR  R L+  MV+T+EPG YFID LL    +N   +   + + +  FK +GG+RIE +V+ T   ++N+T
Sbjct:  266 SDFQALIDAVDAAQLRMGQNVRAGVDYKQLHIDAHLALMGILKEFGILTVSPEAALATGVSAAFFPHGLGHLIGLQVHDVAGFAASDRGGRIERPPGHPYLRLTRVLEPGMVVTIEPGVYFIDMLLDEVKKNGHAAS-VDWQRVEAFKPYGGIRIEDEVVCTDGSAENLT 434          
BLAST of CX288542 vs. ExPASy Swiss-Prot
Match: PEPQ_HAEPS (Xaa-Pro dipeptidase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=pepQ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.416e-20
Identity = 54/157 (34.39%), Postives = 87/157 (55.41%), Query Frame = 3
Query:   96 MKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYP---KGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREIS 557
            M+ G+ ++  H    + I + L +   +    D++    +   F PHGLGH LG+  HD  G+    +GT ++      SLR  R+L E MV+T+EPG YFI+ LL    +N   + FFN + I  FK +GG+R E ++++ A G++N+T+    IS
Sbjct:  283 MQVGMNYLSYHTQMHRWISQMLHQFEFVKLPADQIFEEGISRTFFPHGLGHQLGLQVHDVAGFQQNHRGTRKAPPEIYPSLRCTRDLAEGMVLTIEPGFYFIEMLL-NQWKNHPLAPFFNWQKIDEFKRYGGIRTEDNIVMRATGAENLTAKAESIS 438          
BLAST of CX288542 vs. ExPASy Swiss-Prot
Match: PEPQ_XANC5 (Xaa-Pro dipeptidase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=pepQ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.849e-20
Identity = 57/170 (33.53%), Postives = 91/170 (53.53%), Query Frame = 3
Query:   36 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 536
            SD   + +AV  A   +   ++ GV +  +H  A   ++  LK+ GV+  + +  +A  + A F PHGLGH +G+  HD  G+    +G    +  G   LR  R L+  MV+T+EPG YFID LL    +N   +   N + +  FK +GG+RIE +V+ T   ++N+T
Sbjct:  266 SDFQALIDAVDAAQLRMGQNVRAGVDYKQLHIEAHLALMGILKEFGVLTVSPEAALATGVSAAFFPHGLGHLIGLQVHDVAGFAASDRGGRIERPAGHPYLRLTRVLEPGMVVTIEPGVYFIDMLLDEVKKNGHAAS-VNWQRVEAFKPYGGIRIEDEVVCTDGSAENLT 434          
BLAST of CX288542 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEHH (Xaa-Pro dipeptidase OS=Shewanella halifaxensis (strain HAW-EB4) GN=pepQ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.849e-20
Identity = 55/154 (35.71%), Postives = 84/154 (54.55%), Query Frame = 3
Query:   84 VINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 536
            +IN M+PGV +  +H      + + L    ++ G+V  ++   + +VF PHGLGH LGI  HD GG+    KG   +       LR  REL    V+T+EPG Y ID+LL    +++  S+  N   +   + FGG+RIE +V+V  +  +NMT
Sbjct:  281 IINLMQPGVSYAQLHVETHYKLAQILLDFDIVSGDVQGLVEQGITSVFFPHGLGHMLGIQVHDMGGFLGDDKGAHIAVPEAHPFLRCTRELDVNQVLTIEPGVYIIDSLLNELKQDKRQSQ-INWNTVEVLRPFGGIRIEDNVIVHRDRIENMT 433          
BLAST of CX288542 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEB5 (Xaa-Pro dipeptidase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=pepQ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.849e-20
Identity = 54/165 (32.73%), Postives = 89/165 (53.94%), Query Frame = 3
Query:   51 IYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 536
            +  A+ KA   +I+ M+PGV + D+H      + + L    +  G+V  ++   + + F PHGLGH LG+  HD GG+    +GT  +       LR  R L    V+T+EPG Y ID LL   ++ ++  +  N + +   + FGG+RIE +V+V  + ++NMT
Sbjct:  270 LITAMNKAQLELIDMMRPGVRYPDLHLATHAKVAQMLLDFDLATGDVQGLVDQGITSAFFPHGLGHMLGLQVHDVGGFSHDERGTHIAAPEAHPFLRCTRILAPNQVLTMEPGLYIIDTLL-NELKQDNRGQQINWQTVDELRPFGGIRIEDNVIVHQDRNENMT 433          
BLAST of CX288542 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEB8 (Xaa-Pro dipeptidase OS=Shewanella baltica (strain OS185) GN=pepQ PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.415e-20
Identity = 54/165 (32.73%), Postives = 88/165 (53.33%), Query Frame = 3
Query:   51 IYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 536
            +  A+ KA   +I+ M+PGV + D+H      + + L    +  G+   ++   + + F PHGLGH LG+  HD GG+    +GT  +       LR  R L    V+T+EPG Y ID LL   ++ +S  +  N + +   + FGG+RIE +V+V  + ++NMT
Sbjct:  270 LITAMNKAQLELIDMMRPGVRYPDLHLATHAKVAQMLLDFDLATGDAQGLVDQGITSAFFPHGLGHMLGLQVHDVGGFSHDERGTHIAAPEAHPFLRCTRILAPNQVLTMEPGLYIIDTLL-NELKQDSRGQQINWQTVDELRPFGGIRIEDNVIVHQDRNENMT 433          
BLAST of CX288542 vs. ExPASy Swiss-Prot
Match: PEPQ_ERWT9 (Xaa-Pro dipeptidase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=pepQ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.154e-20
Identity = 60/171 (35.09%), Postives = 90/171 (52.63%), Query Frame = 3
Query:   36 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVG-NVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 536
            SD + +   + K    +I  MK GV + + H+     I   L K  ++ G   + M+   L   FMPHG+GH LG+  HD  G+    +GT  +       LR  R L+  MV+T+EPG YFID+LL P    +  S++F+   I   K +GG+RIE +V++  N  +NMT
Sbjct:  268 SDYAQLIKDMNKEELELIATMKTGVRYTEYHQQMHYRIASLLLKHQLVNGLTAEAMVKENLTGPFMPHGIGHSLGLQVHDVAGFMQDDRGTHLAAPQQYPYLRCTRVLEPGMVLTIEPGIYFIDSLLAPWRAGK-FSQYFDWAKIDELKAYGGIRIEDNVVIHKNSVENMT 437          
The following BLAST results are available for this feature:
BLAST of CX288542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
PEPQ2_IDILO6.355e-2132.73Xaa-Pro dipeptidase 2 OS=Idiomarina loihiensis GN=... [more]
PEPQ_SHEB98.300e-2133.33Xaa-Pro dipeptidase OS=Shewanella baltica (strain ... [more]
PEPQ_SHEB28.300e-2133.33Xaa-Pro dipeptidase OS=Shewanella baltica (strain ... [more]
PEPQ_XANAC1.416e-2032.94Xaa-Pro dipeptidase OS=Xanthomonas axonopodis pv. ... [more]
PEPQ_HAEPS1.416e-2034.39Xaa-Pro dipeptidase OS=Haemophilus parasuis serova... [more]
PEPQ_XANC51.849e-2033.53Xaa-Pro dipeptidase OS=Xanthomonas campestris pv. ... [more]
PEPQ_SHEHH1.849e-2035.71Xaa-Pro dipeptidase OS=Shewanella halifaxensis (st... [more]
PEPQ_SHEB51.849e-2032.73Xaa-Pro dipeptidase OS=Shewanella baltica (strain ... [more]
PEPQ_SHEB82.415e-2032.73Xaa-Pro dipeptidase OS=Shewanella baltica (strain ... [more]
PEPQ_ERWT93.154e-2035.09Xaa-Pro dipeptidase OS=Erwinia tasmaniensis (strai... [more]

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Properties
Property NameValue
Genbank descriptionC02001F01SK IF1 Citrus clementina cDNA clone C02001F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288542 ID=CX288542; Name=CX288542; organism=Citrus clementina; type=EST; length=587bp
TTACTTGCTCATTCCCTGTAAATGGGAAGTTTACTAGTGATCAGAGTCTT
ATATATAATGCCGTCCTCAAAGCTCACAATGCTGTCATAAATGCAATGAA
ACCTGGAGTGTGCTGGGTGGATATGCACAAATTGGCAGAGAAAATTATTC
TGGAGTCGCTGAAGAAGGGTGGTGTCATGGTTGGGAATGTGGATGAGATG
ATGGCTGCACGATTGGGTGCTGTTTTCATGCCTCATGGTCTTGGGCATTT
CTTGGGTATTGACACTCATGATCCTGGCGGCTACCCAAAGGGAACAGAAA
GATCAAAAGAACCTGGCTTAAAATCTCTACGTACAGTTAGAGAACTCCAG
GAGAGAATGGTGATCACAGTGGAGCCTGGATGTTATTTCATTGATGCTCT
GTTGGTCCCGGCCATGGAAAATGAAAGCACTTCCAAGTTTTTTAATCATG
AAGTAATTGGCAGATTCAAAGATTTTGGCGGTGTTCGCATTGAAAGTGAT
GTGCTTGTCACTGCCAATGGAAGCAAGAACATGACTAGCGTACCTCGGGA
AATATCAGATATTGAAGCCATAATGGCAGGCGCTCCA
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