CX288558
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.746e-12 Identity = 45/146 (30.82%), Postives = 71/146 (48.63%), Query Frame = 2 Query: 8 VRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSAT-DPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQ 442 +RA++Y+ AQ L + C L++ T + L G GL E+I TF L++ ++ DP+ S V + PL G V LA TG +NPARS G A+ W + W++W+GP +G ++A F ++ Sbjct: 107 LRALLYVAAQLLASSLACILLRYLSGGMVTP----VHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMA---TGVWTNHWVYWIGPLLGGSLAGFVYE 240
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 9.746e-12 Identity = 44/152 (28.95%), Postives = 68/152 (44.74%), Query Frame = 2 Query: 2 SLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQFILRA 457 S +RA MY+ AQC G I G L+ Y A + + G E I TF++V F +TDP + + + IG A ++P +NPARSLG + + K WD W++W GP +G + +++I + Sbjct: 140 SPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTFLVVLCYFVSTDPMKKFMGN-----SAASIGCAYSACCFVSMPY----LNPARSLGPSFVLNK---WDSHWVYWFGPLVGGMASGLVYEYIFNS 279
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.273e-11 Identity = 47/153 (30.72%), Postives = 74/153 (48.37%), Query Frame = 2 Query: 2 SLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGA---NELADGYSTGTGLGAEIIGTFVLVYTVFSAT-DPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQFI 448 +L R+ +Y+ AQ G+ C L++ GG A + LADG G+ AE + TF L+ + + DP+R A P+L L +G +A +TG +NPARS G A+ + W W++WVGP G +A ++ + Sbjct: 101 TLFRSALYVAAQLAGSSLACLLLRCLT-------GGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANT----VAGGALTGASMNPARSFGPALATGE---WAHHWVYWVGPLAGGPLAVVAYELL 239
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.171e-11 Identity = 45/155 (29.03%), Postives = 74/155 (47.74%), Query Frame = 2 Query: 2 SLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSAT-DPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQFILRASA 463 +L R+ +Y+ AQ L + C L++ T + LA+G G+ AE + TF L++ +++ DP++ +P PL G V +A ++G +NPARS G AV W W++WVGP G +A ++ A+A Sbjct: 96 TLFRSSLYIAAQMLASSAACFLLRWLTGGLATP----VHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKL-----LPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAVA---SGVWTHHWVYWVGPLAGGPLAVLVYECCFMAAA 238
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: AQPZ_SHIFL (Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11 Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 2 Query: 17 VMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELAD---------GYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQFIL 451 V Y++AQ +G I L+ S T + A+ A GYS + L E++ + + + ATD A AP+ IG A+ ++HL +IPVT T +NPARS A I++ A + W FWV P +G I ++ +L Sbjct: 82 VGYVIAQVVGGIVAAALLYLIA-SGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARST-AVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL 227
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOLI (Aquaporin Z OS=Escherichia coli (strain K12) GN=aqpZ PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11 Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 2 Query: 17 VMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELAD---------GYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQFIL 451 V Y++AQ +G I L+ S T + A+ A GYS + L E++ + + + ATD A AP+ IG A+ ++HL +IPVT T +NPARS A I++ A + W FWV P +G I ++ +L Sbjct: 82 VGYVIAQVVGGIVAAALLYLIA-SGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARST-AVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL 227
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOL6 (Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11 Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 2 Query: 17 VMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELAD---------GYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQFIL 451 V Y++AQ +G I L+ S T + A+ A GYS + L E++ + + + ATD A AP+ IG A+ ++HL +IPVT T +NPARS A I++ A + W FWV P +G I ++ +L Sbjct: 82 VGYVIAQVVGGIVAAALLYLIA-SGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARST-AVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL 227
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: AQPZ_ECO57 (Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11 Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 2 Query: 17 VMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELAD---------GYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQFIL 451 V Y++AQ +G I L+ S T + A+ A GYS + L E++ + + + ATD A AP+ IG A+ ++HL +IPVT T +NPARS A I++ A + W FWV P +G I ++ +L Sbjct: 82 VGYVIAQVVGGIVAAALLYLIA-SGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARST-AVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL 227
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: AQPZ2_AGRT5 (Aquaporin Z 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ2 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11 Identity = 50/145 (34.48%), Postives = 71/145 (48.97%), Query Frame = 2 Query: 17 VMYMVAQCLGAICGCGL--VKAFQKSYYTRYGGGANELAD----GYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPV-LAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAA 430 V Y++AQ GAI V A K+ G +N + GYS + L EII T + + +T + VP AP+ IG A+ ++HL +IPVT T +NPARS G A ++ A W+FW+ P +G A A Sbjct: 82 VPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGR-------VPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQA-LFVGGWALQQLWLFWLAPIVGGAAGA 218 The following BLAST results are available for this feature:
BLAST of CX288558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 149
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288558 ID=CX288558; Name=CX288558; organism=Citrus clementina; type=EST; length=602bpback to top |