CX288558
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.927e-16 Identity = 56/158 (35.44%), Postives = 83/158 (52.53%), Query Frame = 2 Query: 2 SLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSAT-DPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 472 SL+RA+ Y +AQ LGA+ L++ R G A LA G + E TF L+Y ++ DPKR HV +APL +GF + LA P G G+NPAR G A++ + W W++W+GPF+GA +A +++++ SA A Sbjct: 104 SLIRALFYWLAQLLGAVVATLLLRLTTGGM--RPPGFA--LASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRG----HVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFVGAGLAGLLYEYLVIPSADAA 250
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 2.927e-16 Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = 2 Query: 2 SLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQFIL 451 SL+RA Y+ AQ LGA+ G ++ + R N L G S G EI T V +F+ D +RN R V L +GF++ + HL + TG G+NPARS A++ + + + W++WVGP IG + + + F+L Sbjct: 80 SLLRAFCYIAAQLLGAVAGAAVLYSVTPPA-VRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FSNHWVYWVGPIIGGGLGSLLYDFLL 221
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 2.927e-16 Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = 2 Query: 2 SLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQFIL 451 SL+RA Y+ AQ LGA+ G ++ + R N L G S G EI T V +F+ D +RN R V L +GF++ + HL + TG G+NPARS A++ + + + W++WVGP IG + + + F+L Sbjct: 82 SLLRAFCYIAAQLLGAVAGAAVLYSVTPPA-VRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FSNHWVYWVGPIIGGGLGSLLYDFLL 223
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.823e-16 Identity = 56/152 (36.84%), Postives = 80/152 (52.63%), Query Frame = 2 Query: 2 SLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTR-YGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSA-TDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQFIL 451 S+ RA +Y + Q L + C L+ SY T G + LA G S G+ EII TF L++TV++ DPK+ + D P+L GF V LA +G +NPARS G A++ W D W++WVGP IG +A F ++ +L Sbjct: 93 SVFRAFLYWIDQLLASSAACFLL-----SYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLT----GFVVGANILAGGAFSGASMNPARSFGPALVSGN---WTDHWVYWVGPLIGGGLAGFIYENVL 232
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 3.823e-16 Identity = 55/158 (34.81%), Postives = 81/158 (51.27%), Query Frame = 2 Query: 2 SLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 472 +++ Y +AQCLG+I C L+ G +A G G+ EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA P +G +NPARS G AV+ + WI+WVGP +G A+A + + S + A Sbjct: 97 TVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHG----VAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVV---SGDFSQIWIYWVGPLVGGALAGLIYGDVFIGSYAPA 243
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.518e-16 Identity = 53/147 (36.05%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 2 SLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYH 439 +L+ Y +AQCLG+I C L+ G ++ G G+ EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA P +G +NPARS G AV+ WI+WVGP +G A+A + Sbjct: 97 TLITGFFYWIAQCLGSIVACLLLVFVTNGKSVPTHG----VSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVV---SGDLSQIWIYWVGPLVGGALAGLIY 232
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.112e-15 Identity = 50/150 (33.33%), Postives = 75/150 (50.00%), Query Frame = 2 Query: 2 SLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQFIL 451 SL+RA YM AQ LGA+ G ++ + R N L G S EI T V +F+ D +RN R V L +GF++ + HL + TG G+NPARS A++ + + + W++WVGP IG + + + F+L Sbjct: 82 SLLRAFCYMAAQLLGAVAGAAVLYSVTPPA-VRGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.898e-15 Identity = 58/158 (36.71%), Postives = 83/158 (52.53%), Query Frame = 2 Query: 2 SLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGA---NELADGYSTGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQFILRASA 463 +++ V Y +AQ LG+ C L+K Y T GG A + +A G + G+ EII TF LVYTV++ A DPK+ + + +APL IG V LA P +G +NPARS G AV + W++WVGP IG +A + + S+ Sbjct: 97 TVITGVFYWIAQLLGSTAACFLLK-----YVT--GGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FSGHWVYWVGPLIGGGLAGLIYGNVFMGSS 240
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.478e-15 Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = 2 Query: 2 SLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGA------EIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQF 445 S++RAV Y +AQ LG+I +++ N G+ G+G E++ TF L+YTV+ +A DPKR A V +APL IG V L P G +NPA + G +++ + W WIFWVGP +GAA+AA +++ Sbjct: 99 SVIRAVYYWIAQLLGSIVAALVLRLVTN----------NMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWQ---WHQHWIFWVGPLLGAALAALVYEY 236
BLAST of CX288558 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.478e-15 Identity = 54/154 (35.06%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 2 SLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYKKDKAWDDQWIFWVGPFIGAAIAAFYHQFILRAS 460 +++ ++Y VAQ LGA C L++ Y T G S G+ EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA P +G +NPARS G AV + W++WVGP +G +A + + AS Sbjct: 97 TILTGILYWVAQLLGASVACFLLQ-----YVTHGQAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLVGGGLAGLVYGDVFIAS 238 The following BLAST results are available for this feature:
BLAST of CX288558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 149
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288558 ID=CX288558; Name=CX288558; organism=Citrus clementina; type=EST; length=602bpback to top |