CX288559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288559 vs. ExPASy Swiss-Prot
Match: NIT3_YEAST (Probable hydrolase NIT3 OS=Saccharomyces cerevisiae GN=NIT3 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.264e-17 Identity = 61/195 (31.28%), Postives = 98/195 (50.26%), Query Frame = 1 Query: 22 ASSVRVAVAQMT-SINDLAANFATSSRLVKEAASA--GAKLLCLPENFSYVGDKDGDSLKVAETLD----GPIMQGYCSLARESSMWLSLGGFQEKGSDDAHLCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKDIVAVDSPVGRLGPTVCYDLRFPELYQQLRFQHEAQVLLVPSAFTKVTG 585 + ++VA+ Q++ S D AN ++ ++ A KL+ LPE F+ D K +E ++ +Q +LA + + L G E + NT ++ ++ G + +RK+HLFDVDIP G S+ ES G+ +D+ G+ G +CYD+RFPEL L + A ++ PSAF VTG Sbjct: 8 SQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTD-QFRKYSEVINPKEPSTSVQFLSNLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEKSTTIDTKYGKFGVGICYDMRFPEL-AMLSARKGAFAMIYPSAFNTVTG 200
BLAST of CX288559 vs. ExPASy Swiss-Prot
Match: NIT2A_XENLA (Omega-amidase NIT2-A OS=Xenopus laevis GN=nit2a PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.264e-17 Identity = 56/171 (32.75%), Postives = 88/171 (51.46%), Query Frame = 1 Query: 79 NFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSL--KVAETLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDAHLCNTHVLVDDAGNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKDIVAVDSPVGRLGPTVCYDLRFPELYQQLRFQHEAQVLLVPSAFTKVTG 585 N + +L+KEAA GA+++ LPE F+ G + + AE + G + +A+E ++L G E+ D L NT + G + +RK+HLFD+D+PG ++ES G D+P ++G +CYD+RF EL Q+ Q+L+ P AF TG Sbjct: 20 NLNRACKLIKEAAQKGAQIVALPECFN---SPYGTTYFPEYAEKIPGESTELLSQVAKECGIYLIGGSIPEE--DCGKLYNTCAVFGPDGTLLVKHRKIHLFDIDVPGKIRFQESETLSPGDSFSVFDTPYCKVGVGICYDIRFAEL-AQIYANKGCQLLVYPGAFNMTTG 184
BLAST of CX288559 vs. ExPASy Swiss-Prot
Match: Y480_MYCTU (UPF0012 hydrolase Rv0480c/MT0498 OS=Mycobacterium tuberculosis GN=Rv0480c PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.189e-13 Identity = 61/179 (34.08%), Postives = 90/179 (50.28%), Query Frame = 1 Query: 31 VRVAVAQMTSINDLAANFATSSRLVKEAASAGAKLLCLPENFSYVGDKDGDSLK-VAETLDGPIMQGYCSLARESSMWLSLGGFQEKGSDDAHLCNTHVLVDDA--GNIRSTYRKMHLFDVDIPGGRSYKESSFTEAGKDIVAVDSPVGRLGPTVCYDLRFPELYQQLRFQHEAQVLLV 558 +R+A+AQ+ S D AAN + EAA+AGA+L+ PE + G L+ VAE +DGP G +A E+ + + G F G D + NT + + Y K+HL+D + ES G++ V V R+G TVCYD+RFP LY +L + AQ++ V Sbjct: 61 MRIALAQIRSGTDPAANLQLVGKYAGEAATAGAQLVVFPEATMC---RLGVPLRQVAEPVDGPWANGVRRIATEAGITVIAGMFTPTG--DGRVTNTLIAAGPGTPNQPDAHYHKIHLYDAF-----GFTESRTVAPGREPVVVVVDGVRVGLTVCYDIRFPALYTELA-RRGAQLIAV 228 The following BLAST results are available for this feature:
BLAST of CX288559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288559 ID=CX288559; Name=CX288559; organism=Citrus clementina; type=EST; length=586bpback to top |