CX288560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 3.316e-46 Identity = 86/96 (89.58%), Postives = 92/96 (95.83%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 289 YTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+++NK W+DHWIFW GPFIGAALAALYHQ+VIRAIPFKSK Sbjct: 194 YTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVVIRAIPFKSK 289
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 5.656e-46 Identity = 85/96 (88.54%), Postives = 91/96 (94.79%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 289 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA++YN+ AW DHWIFW GPFIGAALAA+YH +VIRAIPFKS+ Sbjct: 192 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRAHAWHDHWIFWVGPFIGAALAAIYHVVVIRAIPFKSR 287
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.646e-45 Identity = 82/96 (85.42%), Postives = 92/96 (95.83%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 289 YTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA++YN+ AW+DHWIFW GPFIGAALAA+YH ++IRA+PFKS+ Sbjct: 192 YTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRSHAWNDHWIFWVGPFIGAALAAIYHVVIIRALPFKSR 287
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 6.254e-45 Identity = 83/93 (89.25%), Postives = 89/93 (95.70%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPF 280 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYN + AW+DHWIFW GP IGAALAA+YHQI+IRA+PF Sbjct: 191 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIGAALAAIYHQIIIRAMPF 283
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.819e-44 Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 289 YTVFSATDAKR ARDSHVPILAPLPIGFAVFLVHLAT+ ITGTGINPARSLGAA+IYN+ AW DHWIFW GPFIGAALAA+YHQ++IRAIPFKS+ Sbjct: 191 YTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIGAALAAIYHQVIIRAIPFKSR 286
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 5.853e-43 Identity = 79/90 (87.78%), Postives = 85/90 (94.44%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 271 YTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYN D+AWDDHWIFW GPFIGAA+AA YHQ V+RA Sbjct: 183 YTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNDKAWDDHWIFWVGPFIGAAIAAAYHQYVLRA 272
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.703e-42 Identity = 80/95 (84.21%), Postives = 85/95 (89.47%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 286 YTVFSATDAKR ARDSHVP LAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IY+ W HWIFW GPF GAALAA+YHQ+V+RAIPFKS Sbjct: 198 YTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAGAALAAVYHQVVLRAIPFKS 292
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 2.224e-42 Identity = 79/95 (83.16%), Postives = 85/95 (89.47%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 286 YTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK + WDDHWIFW GPFIGAA+AA YHQ V+RA KS Sbjct: 181 YTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKS 275
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 3.794e-42 Identity = 76/95 (80.00%), Postives = 86/95 (90.53%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 286 YTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+IYNKD+ WDDHWIFW GP +GAA+AA YHQ ++RA K+ Sbjct: 188 YTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQYILRAGAIKA 282
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 4.955e-42 Identity = 78/95 (82.11%), Postives = 86/95 (90.53%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 286 YTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD+AWD HWIFW GPF GAA+AA YHQ V+RA K+ Sbjct: 182 YTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKA 276 The following BLAST results are available for this feature:
BLAST of CX288560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288560 ID=CX288560; Name=CX288560; organism=Citrus clementina; type=EST; length=467bpback to top |