CX288560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 6.471e-42 Identity = 77/95 (81.05%), Postives = 86/95 (90.53%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 286 YTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS+GAA+IYN+ +AWDDHWIFWAGPFIGA AA YHQ ++RA K+ Sbjct: 178 YTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKA 272
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 6.471e-42 Identity = 75/95 (78.95%), Postives = 86/95 (90.53%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 286 YTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA++YNKD+ WDDHWIFW GP +GAA+AA YHQ ++RA K+ Sbjct: 190 YTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQYILRAGAIKA 284
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 8.452e-42 Identity = 78/95 (82.11%), Postives = 85/95 (89.47%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 286 YTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK + WDDHWIFW GPFIGAA+AA YHQ V+RA KS Sbjct: 183 YTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKS 277
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.104e-41 Identity = 77/90 (85.56%), Postives = 84/90 (93.33%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 271 YTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA++YN +AW D WIFW GPFIGAA+AALYHQIV+RA Sbjct: 187 YTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 276
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.442e-41 Identity = 76/90 (84.44%), Postives = 84/90 (93.33%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 271 YTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA++YN +AW D WIFW GPFIGAA+AALYHQIV+RA Sbjct: 182 YTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 271
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.883e-41 Identity = 77/95 (81.05%), Postives = 84/95 (88.42%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 286 YTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I+NK + WDDHWIFW GPFIGA +AA YHQ V+RA KS Sbjct: 181 YTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQFVLRASGSKS 275
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 2.459e-41 Identity = 77/90 (85.56%), Postives = 84/90 (93.33%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 271 YTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD+AWDD WIFW GP IGAA+AA YHQ V+RA Sbjct: 187 YTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 276
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 2.459e-41 Identity = 77/90 (85.56%), Postives = 84/90 (93.33%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 271 YTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD+AWDD WIFW GP IGAA+AA YHQ V+RA Sbjct: 188 YTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 277
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 2.459e-41 Identity = 76/90 (84.44%), Postives = 83/90 (92.22%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 271 YTVFSATD KRNARDSH+P+LAPLPIGFAVF+VHLATIPITGTGINPARSLG A+IYNKD+AWDD WIFW GP IGAA+AA YHQ V+RA Sbjct: 187 YTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 276
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 4.195e-41 Identity = 74/90 (82.22%), Postives = 84/90 (93.33%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 271 YTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLG A++YN ++AW D WIFW GPFIGAA+AALYHQ+++RA Sbjct: 185 YTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAALYHQVILRA 274 The following BLAST results are available for this feature:
BLAST of CX288560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288560 ID=CX288560; Name=CX288560; organism=Citrus clementina; type=EST; length=467bpback to top |